Workflow for the COSMIC study samples. Based on IMP assemblies and automatic single sample binning, resulting bins are linked in different samples related to 1 patient (different time-points of fecal samples and samples from the mother).
Method testing and analyses of Oxford Nanopore Technology (ONT) sequencing runs
Data obtained by sequencing "generous donor B" across several runs
Original data prepared by Rashi (post-sequencing)
Initial analyses performed by CCL