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  • Issues

  • Open 31
  • Closed 25
  • All 56
New issue
  • Priority Created date Updated date Milestone due date Due date Popularity Label priority Manual Title Weight Blocking
  • Installation: build sortmerna index
    #60 · created May 12, 2022 by Valentina Galata   Automated Setup   discussion enhancement feature installation
    • 1
    updated May 12, 2022
  • Installation: skip not required targets
    #59 · created Apr 29, 2022 by Valentina Galata   enhancement feature installation
    • 0
    updated Apr 29, 2022
  • Can not initializing conda environment
    #58 · created Apr 26, 2022 by Mimi   incident installation
    • 23
    updated May 16, 2022
  • Binning: add updated binny
    #57 · created Feb 25, 2022 by Valentina Galata   Analysis & Binning updates   enhancement feature update
    • 2
    updated Apr 09, 2022
  • Error in rule merge_assembly_cap3 - segmentation fault
    #56 · created Dec 07, 2021 by javiercnav   incident
    • 1
    updated Dec 07, 2021
  • Job fails due to conda environment installation
    #55 · created Dec 03, 2021 by michoug   documentation incident installation
    • 3
    updated Dec 08, 2021
  • Refactoring
    #53 · created Nov 10, 2021 by pedro queiros   Overhaul
    • 5
    updated Nov 15, 2021
  • Assembly/Analysis: replace perl scripts for contig stats
    #52 · created Oct 05, 2021 by Valentina Galata   discussion enhancement feature
    • 0
    updated Oct 05, 2021
  • Preprocessing: kneaddata for reads filtering
    #51 · created Sep 30, 2021 by Valentina Galata   discussion enhancement feature
    • 0
    updated Sep 30, 2021
  • Assembly stats: metaQUAST
    #50 · created Sep 24, 2021 by Valentina Galata   discussion enhancement feature
    • 2
    updated Sep 27, 2021
  • Unexpected behavior: `ancient` keyword may trigger Snakemake scheduler issues
    #48 · created Sep 16, 2021 by Susheel Busi   incident
    • 0
    updated Sep 16, 2021
  • Conda envs: smaller YAML files
    #47 · created Sep 13, 2021 by Valentina Galata   Overhaul   discussion enhancement
    • 1
    updated Feb 04, 2022
  • Transcriptome assembly with rnaSPAdes
    #46 · created Sep 10, 2021 by Valentina Galata   bug
    • 0
    updated Sep 13, 2021
  • Unit testing, CI and merging
    #45 · created Aug 27, 2021 by Valentina Galata   Overhaul   discussion enhancement test
    • 1
    updated Oct 26, 2021
  • Formatting convention
    #43 · created Aug 27, 2021 by Valentina Galata   Overhaul   discussion documentation enhancement
    • 3
    updated Oct 08, 2021
  • Configuration: configs, profiles and launchers
    #41 · created Aug 27, 2021 by Valentina Galata   Overhaul   discussion enhancement
    • 2
    updated Apr 19, 2022
  • nonpareil: simplify the rule
    #38 · created Aug 23, 2021 by Valentina Galata   Overhaul   enhancement
    • 1
    updated Feb 10, 2022
  • Assembly: MG/MT assembly with MetaSPAdes
    #36 · created Aug 23, 2021 by Valentina Galata   enhancement feature
    • 0
    updated Aug 23, 2021
  • Config: use appropriate in-built data types   0 of 3 tasks completed
    #35 · created Aug 20, 2021 by Valentina Galata   Overhaul   enhancement
    • 3
    updated Sep 24, 2021
  • SortMeRNA rule: minor bug and formatting
    #33 · created Aug 18, 2021 by Valentina Galata   Overhaul   bug enhancement
    • 2
    updated Oct 08, 2021
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