Issues · IMP / IMP3 · GitLab

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Binny error: Vizbin-contig-names-points file empty

#29 · created Jul 28, 2021 by Susheel Busi
- 0
updated Jul 28, 2021
Bug: failing to index new fasta files for filtering for some step combinations

#28 · created Jul 23, 2021 by Valentina Galata bug
- 0
updated Jul 27, 2021
Taxonomy: kraken2 on reads: combine PE and SE reads

#27 · created Jul 20, 2021 by Valentina Galata enhancement
- 3
updated Jul 21, 2021
Bug: unmerge-paired-reads.sh must be executable

#26 · created Jul 09, 2021 by Valentina Galata bug
- 1
updated Jul 09, 2021
Feature/Doc: SE (metaT) as input

#25 · created Jul 08, 2021 by Valentina Galata documentation feature
- 2
updated Jul 23, 2021
Bug: config tmp folder is ignored during rRNA filtering

#24 · created Jun 09, 2021 by Valentina Galata bug
- 0
updated Jun 09, 2021
PathoFact: include latest version

#23 · created Mar 01, 2021 by Valentina Galata PathoFact feature update
- 1
updated Mar 01, 2021
Installation: no rules for databases setup

#22 · created Feb 11, 2021 by Valentina Galata enhancement installation
- 0
updated Jul 05, 2021
Preprocessing/trimming: cutadapt, nextseq

#21 · created Feb 09, 2021 by Valentina Galata bug
- 1
updated Feb 09, 2021
Docs: Trimmomatic adapters

#18 · created Nov 11, 2020 by Valentina Galata documentation
- 0
updated Nov 11, 2020
MANTIS: setup and rules 5 of 5 tasks completed

#15 · created Oct 15, 2020 by Valentina Galata MANTIS enhancement feature installation
- 8
updated Jun 18, 2021
Read filtering: rm rRNA reads: replace sortmerna

#12 · created Aug 17, 2020 by Valentina Galata discussion enhancement feature
- 1
- 4
updated Jun 02, 2021
Assembly: merging/consensus: replace CAP3

#11 · created Jul 22, 2020 by Valentina Galata Assembly enhancement
- 16
updated Mar 17, 2021