Skip to content

GitLab

  • Projects
  • Groups
  • Snippets
  • Help
    • Loading...
  • Help
    • Help
    • Support
    • Submit feedback
  • Sign in
P
PathoFact
  • Project overview
    • Project overview
    • Details
    • Activity
    • Releases
  • Repository
    • Repository
    • Files
    • Commits
    • Branches
    • Tags
    • Contributors
    • Graph
    • Compare
    • Locked Files
  • Issues 10
    • Issues 10
    • List
    • Boards
    • Labels
    • Service Desk
    • Milestones
  • Merge Requests 0
    • Merge Requests 0
  • Requirements
    • Requirements
    • List
  • CI / CD
    • CI / CD
    • Pipelines
    • Jobs
    • Schedules
  • Security & Compliance
    • Security & Compliance
    • Dependency List
    • License Compliance
  • Operations
    • Operations
    • Environments
  • Packages & Registries
    • Packages & Registries
    • Package Registry
    • Container Registry
  • Analytics
    • Analytics
    • CI / CD
    • Code Review
    • Insights
    • Issue
    • Repository
    • Value Stream
  • Wiki
    • Wiki
  • External Wiki
    • External Wiki
  • Snippets
    • Snippets
  • Members
    • Members
  • Collapse sidebar
  • Activity
  • Graph
  • Create a new issue
  • Jobs
  • Commits
  • Issue Boards
  • Laura Denies
  • PathoFact
  • Issues

  • Open 10
  • Closed 56
  • All 66
New issue
  • Priority Created date Last updated Milestone due date Due date Popularity Label priority Manual Weight
  • virulence classifier: class probability cutoff?
    #67 · opened Apr 15, 2021 by Nick Youngblut
    • 0
    updated Apr 15, 2021
  • assembled contigs fa files
    #65 · opened Apr 02, 2021 by mhmism
    • 2
    updated Apr 13, 2021
  • How estimate relative abundance?
    #63 · opened Mar 21, 2021 by AA8898
    • 4
    updated Apr 15, 2021
  • error while running run_PLASMID
    #61 · opened Mar 17, 2021 by sabina-llr
    • 5
    updated Apr 13, 2021
  • erorr while running classifier and run_Virifinder
    #60 · opened Mar 05, 2021 by AA8898
    • 2
    updated Mar 23, 2021
  • Input: allow to provide a protein FAA file
    #59 · opened Mar 05, 2021 by Valentina Galata   IMP enhancement
    • 0
    updated Mar 05, 2021
  • PathoFact for assembled genomes
    #57 · opened Jan 31, 2021 by in3ska
    • 3
    updated Apr 12, 2021
  • Skip prodigal and use curated annotation
    #54 · opened Dec 23, 2020 by avilaHugo
    • 1
    updated Jan 19, 2021
  • intallation with docker/singularity
    #42 · opened May 27, 2020 by soilmicrobiome   discussion enhancement
    • 0
    updated Jun 08, 2020
  • Snakemake: use && or || to concat CMDs in rules
    #10 · opened Apr 16, 2020 by Valentina Galata   enhancement
    • 0
    updated Jun 08, 2020