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Laura Denies
PathoFact
Issues
Open
18
Closed
64
All
82
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Created date
Priority
Created date
Last updated
Milestone due date
Due date
Popularity
Label priority
Manual
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Blocking
Finished NCBI genomes and PathoFact
#83
· created
Oct 30, 2021
by
vkisand
3
updated
Nov 04, 2021
Error in rule Plasmid_aggregate
#82
· created
Oct 19, 2021
by
Ella Kantor
4
updated
Nov 02, 2021
Cluster documentation
#81
· created
Sep 28, 2021
by
Benjamin Wingfield
1
updated
Oct 29, 2021
Question about execution Sna
#80
· created
Sep 25, 2021
by
adolfoisla
incident
1
updated
Oct 29, 2021
Adding information in the final PathoFact report
#79
· created
Sep 23, 2021
by
ntromas
2
updated
Oct 29, 2021
ownHMM_library.R script fails with empty input files
#78
· created
Sep 08, 2021
by
Susheel Busi
1
6
updated
Nov 12, 2021
Feature request: include ARO in output reports
#77
· created
Aug 09, 2021
by
Benjamin Wingfield
enhancement
1
updated
Sep 01, 2021
hmm.R
#76
· created
Aug 03, 2021
by
Matthew Macowan
1
updated
Sep 06, 2021
CondaVerificationError after installation
#75
· created
Jul 09, 2021
by
Andrew
1
updated
Sep 01, 2021
PathoFact block in the DVF step
#74
· created
Jun 21, 2021
by
neptuneyt
1
updated
Jul 06, 2021
The unknown task termination of multiple input genomes
#71
· created
May 11, 2021
by
neptuneyt
4
updated
Sep 06, 2021
Percent identity and query coverage for toxin hits
#68
· created
Apr 27, 2021
by
Vadim (Dani) Dubinsky
0
updated
Apr 27, 2021
virulence classifier: class probability cutoff?
#67
· created
Apr 15, 2021
by
Nick Youngblut
0
updated
Apr 15, 2021
error while running run_PLASMID
#61
· created
Mar 17, 2021
by
sabina-llr
6
updated
Sep 06, 2021
Input: allow to provide a protein FAA file
#59
· created
Mar 05, 2021
by
Valentina Galata
IMP
enhancement
1
updated
Nov 10, 2021
Skip prodigal and use curated annotation
#54
· created
Dec 23, 2020
by
avilaHugo
enhancement
1
updated
Sep 01, 2021
intallation with docker/singularity
#42
· created
May 27, 2020
by
soilmicrobiome
discussion
enhancement
0
updated
Jun 08, 2020
Snakemake: use && or || to concat CMDs in rules
#10
· created
Apr 16, 2020
by
Valentina Galata
enhancement
0
updated
Jun 08, 2020
