Scripts for the analysis of metagenomic data from the first week of life.

Name
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160920_autocluster_contamination_1.R Loading commit data...
160920_autocluster_contamination_1000.R Loading commit data...
160921_autoClust_noConta_evil_1.R Loading commit data...
160921_autoClust_noConta_evil_1000.R Loading commit data...
161114_filter_gff_Pooled_noconta_1.R Loading commit data...
161129_filter_prokka_Pooled_noconta_1.R Loading commit data...
170606_filter_gff_Pooled_noconta_1000.R Loading commit data...
170606_filter_prokka_Pooled_noconta_1000.R Loading commit data...
Breadth.R Loading commit data...
Coverage_Bins.R Loading commit data...
KOanalysis.md Loading commit data...
README.md Loading commit data...
binning.md Loading commit data...
calculateContigLength.pl Loading commit data...
curation.md Loading commit data...
fastaExtractCutRibosomal1000.pl Loading commit data...
fastaExtractCutRibosomalNoCutoff.pl Loading commit data...
fastaExtractrRNA4dom.pl Loading commit data...
getSize Loading commit data...
hmmscan_addBest2gff.pl Loading commit data...
mOTUs.md Loading commit data...
phylophlan.md Loading commit data...
pogenom.md Loading commit data...
runIMP.md Loading commit data...
strainphlan.md Loading commit data...