Commits · 17ec9aa93aa96fedf0ff6424866f03204f09355e · R3 / legacy / bedtools2

Sep 10, 2013
- First commit for new 2.18-alpha branch. · 69d82a78
  nkindlon authored 11 years ago
  
  69d82a78
Jul 24, 2012
- fix flanks for zerlonegth features. · 206cc5d1
  Aaron authored 12 years ago
  
  206cc5d1
Jul 21, 2012
- no need for flanks to the left of chrom.start · 71f9e102
  Aaron authored 12 years ago
  
  71f9e102
Feb 14, 2012
- New tests for slop and flank. Fixed chrom end bug in flank. · fbdd520f
  Aaron authored 13 years ago
  
  fbdd520f
- tweaks to help menus · 2f55ceda
  Aaron authored 13 years ago
  
  2f55ceda
Jan 26, 2012
- tool makefiles not recompile with changes to header · 5184b441
  Aaron authored 13 years ago
  
  5184b441
Dec 29, 2011
- added version to subcommands · f8d62267
  Aaron authored 13 years ago
  
  f8d62267
Dec 12, 2011
- Removed most version.h includes from sub-tools. · b7cb9955
  Aaron authored 13 years ago
  
  b7cb9955
- First pass at new, consolidated CLI. · c2c28746
  Aaron authored 13 years ago
  
  c2c28746
Dec 08, 2011
- Removed need for nullBed. clear() otherFields in GetNextBed(). · 77dbc361
  Aaron authored 13 years ago
  
  77dbc361
- Use new GetNextBed() interface. Redux. · 696f8a89
  Aaron authored 13 years ago
  
  696f8a89
Nov 29, 2011
- Added -header to intersect, window, closest, slop, flank. · 32cb6584
  Aaron authored 13 years ago
  
  32cb6584
Sep 15, 2011
- gcB no longer requires a genome file for BAM. New chromsweep tool. · 2db206ca
  Aaron authored 13 years ago
  
  2db206ca
Jun 16, 2011
- Further tweak to UCSC mysql help. · 363bce89
  Aaron authored 13 years ago
  
  363bce89
- Fixed multi-line UCSC mysql query in the help for multiple tool. Thanks to Brent Pedersen\! · 25fef4e9
  Aaron authored 13 years ago
  
  25fef4e9
Mar 18, 2011
- Corrected stranded logic for + features in flankBed. · 5e0b1650
  Aaron authored 14 years ago
  
  5e0b1650
- Updated flankBed help · 76cc34c7
  Aaron authored 14 years ago
  
  76cc34c7
- Added new flankBed tool. · 95f488dc
  Aaron authored 14 years ago
  
  95f488dc