Explore projects
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COVID-19 / models
GNU General Public License v3.0 onlyComputational models of different aspects of COVID-19
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elixir / beacon
Apache License 2.0ELIXIR Luxembourg's GA4GH Beacon API implementation in Python
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R3 / outreach / templates / presentations / markdown
Creative Commons Zero v1.0 UniversalUpdated -
SMASCH / scheduling-system
GNU Affero General Public License v3.0Scheduling assignments for Parkinson Research Clinic
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IMP / IMP3
MIT LicenseUpdated -
Code used for the analysis of the RNA-seq, ATAC-seq and ChIP-seq datasets produced in this study. Original fastq files deposited in https://ega-archive.org/, under the accession number EGAD00001009288.
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R3 / school / courses
Creative Commons Zero v1.0 UniversalRepository for all slides related to R3 courses.
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Environmental Cheminformatics / pubchem
Artistic License 2.0A project for interactions with PubChem
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R3 / school / git / basic-practice-pages
MIT LicenseBasic practice repository for git trainings
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ESB / CO-INFECTOMICS
MIT LicenseCO-INFECTOMICS - identification of co-infections and other factors associated with COVID-19 severity in the gut microbiome
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genomeanalysis / LuxPARK
Apache License 2.0Updated -
Laura Denies / PathoFact
GNU General Public License v3.0 or laterUpdated -
Elisa Gomezdelope / GRL_sample_similarity_PD
MIT LicenseGraph representation learning modelling pipeline exploiting sample-similarity networks derived from high-throughput omics profiles to learn PD-specific fingerprints from the spatial distribution of molecular abundance similarities in an end-to-end fashion. The scripts apply the graph representation learning modelling pipeline on sample-similarity networks of transcriptomics and metabolomics data from the PPMI and the LuxPARK cohort, respectively.
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