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Integrated meta-omics pipeline

Additional analyses for IMP manuscript

Integrated meta-omics pipeline

LAO time series analyses

Repository for all slides related to R3 courses.

Scripts for the analysis of metagenomic data from the first week of life.

Workflow for the COSMIC study samples. Based on IMP assemblies and automatic single sample binning, resulting bins are linked in different samples related to 1 patient (different time-points of fecal samples and samples from the mother).

This is a pipeline to re-assemble the LAO isolate genomes. I could be potentially modified and applied to any other genome sequencing project.

Analysis workflows for the Leptospirillum ferriphilum omics data

seesaw_code project, see details in:

R package for Gene Regulatory Networks

Integrated Network approach for Cellular Transitions through SIgnalling MOlecules