Explore projects

Integrated meta-omics pipeline

Repository containing the workflow to analyse the RNAseq data as well as auxiliary scripts and tables e.g. for summarizing sample counts.

Playground for experiments on the official http://bioconductor.org/packages/devel/bioc/html/RMassBank.html

Integrated in vitro and in silico modelling delineates the molecular effects of a synbiotic regimen on colorectal-cancer derived cells.

Scripts for the analysis of metagenomic data from the first week of life.

seesaw_code project, see details in:

Analysis workflows for the Leptospirillum ferriphilum omics data

Scripts for the analysis of metagenomic data from the first week of life.

Workflow for the COSMIC study samples. Based on IMP assemblies and automatic single sample binning, resulting bins are linked in different samples related to 1 patient (different time-points of fecal samples and samples from the mother).

Additional analyses for IMP manuscript