Explore projects

An exploration on gene expression data was carried out on single-cell RNAseq analyses of bronchoalveolar lavages from nine COVID-19 patients, three moderate cases, severe case and critical cases, comparing with healthy subjects.

Fork from imp3 repo to use for NOMIS etc.

All scripts used for AMR and MGE analysis of the LAO dataset

A computational method to identify signalling perturbations targeting specific sets of transcription factors for cellular conversion

Gene regulation inference of COVID-19

Scripts, launchers and snakefiles for analysing AMR, MGEs and transmission across mice with and without antibiotic treatment

Repository for all slides related to R3 courses.

Integrated meta-omics pipeline

PINK1 shows LRRK2, Parkin, and SNCA as part of the Parkinson’s network.

PubChem PFAS

Repository for all slides related to R3 courses.