Explore projects
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SMASCH / scheduling-system
GNU Affero General Public License v3.0Scheduling assignments for Parkinson Research Clinic
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ESB / CO-INFECTOMICS
MIT LicenseCO-INFECTOMICS - identification of co-infections and other factors associated with COVID-19 severity in the gut microbiome
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Environmental Cheminformatics / pubchem
Artistic License 2.0A project for interactions with PubChem
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R3 / outreach / templates / presentations / markdown
Creative Commons Zero v1.0 UniversalUpdated -
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R3 / outreach / templates / paper
Creative Commons Attribution 4.0 InternationalTemplate repository for writing a paper the R3 way.
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Laura Denies / PathoFact
GNU General Public License v3.0 or laterUpdated -
R3 / school / git / basic-practice
Apache License 2.0Practice repository basic git training.
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CBG / RNetDys
GNU General Public License v2.0 or laterThis is a mirror from https://github.com/BarlierC/RNetDys.
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R3 / legacy / bedtools2
GNU General Public License v2.0 or laterMirror of https://github.com/arq5x/bedtools2.git -16/07/2015-
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ESB / ONT_pilot_gitlab
GNU General Public License v3.0 or laterMethod testing and analyses of Oxford Nanopore Technology (ONT) sequencing runs Data obtained by sequencing "generous donor B" across several runs Original data prepared by Rashi (post-sequencing) Initial analyses performed by CCLUpdated -
BDS / GeneDER / GeneDER_core
MIT LicenseThis repository contains the scripts that have been developed in the course of the GeneDER project (Biomedical Data Science group - Enrico Glaab Lab).
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This repository contains the code for statistical analyses performed in Chapter 3 of my thesis "Cross-sectional and longitudinal profiling of PD transcriptomics and metabolomics". The project consists on whole blood transcriptomics and blood plasma metabolomics cross-sectional and longitudinal profiling of Parkinson's disease patients and controls from the PPMI cohort and the LuxPARK cohort respectively, to identify differential molecular and higher-level functional features in PD.
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