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# /scratch/users/ldenies/ONT/PathoFact/PathoFact_results/MGE/plasmid/metaspades_plasflow_prediction_final.tsv
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# 5718
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@SBB: is PlasFlow affected by the "fragmentation or lack thereof" of the assemblies. Why are very few plasmids detected in the FLYE results?
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# so checked the number of contigs used by plasflow for the analyses
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# number of contigs used as input:
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# 2533982 flye_filtered.part_001.fna
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# 975951 megahit_filtered.part_001.fna
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