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changelog for v12.1.0

Merged changelog for v12.1.0
changelog into devel_12.1.x
Merged Piotr Gawron requested to merge changelog into devel_12.1.x
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CHANGELOG
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minerva (12.1.0~beta.4) experimental; urgency=medium
* Bug fix: partial zooming is disabled due to issues with hierarchical overlay
* Bug fix: search results were not visible after initial search on top map
* Bug fix: going to export page and back was breaking a map
* Bug fix: export of special characters in pdf is working
-- Piotr Gawron <piotr.gawron@uni.lu> Wed, 17 Oct 2018 14:00:00 +0200
minerva (12.1.0~beta.3) experimental; urgency=medium
* Bug fix: double login with new LDAP credentials doesn't raise error
* Bug fix: empty LDAP filter doesn't raise error
* Bug fix: migration scripts work with database without superadmin privileges
* Bug fix: export didn't work
* Bug fix: coordinates of selected area wasn't processed properly when they
exceeded canvas
-- Piotr Gawron <piotr.gawron@uni.lu> Thu, 11 Oct 2018 14:00:00 +0200
minerva (12.1.0~beta.2) experimental; urgency=medium
* Bug fix: postgres migration script fixed to work with new docker compose
* Bug fix: double click on user add button disabled
* Bug fix: privileges are mirrored correctly across different popups
* Bug fix: plugin tab css fixed
* Small improvement: all ldap parameters are configurable
-- Piotr Gawron <piotr.gawron@uni.lu> Tue, 2 Oct 2018 11:00:00 +0200
minerva (12.1.0~beta.1) experimental; urgency=medium
* Bug fix: uploading sbml file with no ids in glyphs returned error that
could not be easily understand
* Bug fix: sometimes single variant in genomic view was hidden from initial
view
* Bug fix: ds_store files in subfolders crashed zip upload
* Bug fix: when creating new user default privileges were not filled
minerva (12.1.0) stable; urgency=medium
* Small improvement: default privilege value for 'Custom overlays' added
* Small improvement: explicit logging of successful and unsuccessful logins
* Small improvement: clicking on search result icon (on the map) change tab to
the corresponding search results
* Bug fix: passwords in the configuration tab are hidden with '*'
* Bug fix: user has access to transparency level when creating custom semantic
view (without this parametere functionality was very difficult to use)
* Bug fix: loading invalid plugin doesn't render empty div anymore
* Bug fix: sorting of custom overlays was broken when description of overlay
was present
* Bug fix: when there is a problem with adjusting font in complexes (because
the font should be smaller than 1pt) description is not drawn anymore
-- Piotr Gawron <piotr.gawron@uni.lu> Tue, 18 Sep 2018 20:00:00 +0200
minerva (12.1.0~beta.0) experimental; urgency=medium
* Small improvement: option to remove additional overlays generated by custom
semantic zoom
* Small improvement: 'Reduced modulation' edge was displayed differently in
CellDesigner and Minerva
* Small improvement: user-friendly documentation for plugin URL field
* Small improvement: plugins have to access information about active submap
-- Piotr Gawron <piotr.gawron@uni.lu> Wed, 05 Sep 2018 17:00:00 +0200
minerva (12.1.0~alpha.0) experimental; urgency=medium
* Feature: genome browser with gene variants
* Feature: support of all CellDesigner element modifications
* Feature: ldap authentication
* Feature: multicolored anchors for data overlays
* Feature: minerva is distributed using rpm packages
* Bug fix: annotations for elements with mutation in name (like "BID (p15)")
weren't provided properly
* Small improvement: annotations from RHEA are handled
* Small improvement: changing of Terms of Service url allows admin to reset
the status of ToS acceptance for all users
* Small improvement: description of a grouped results in improved
* Small improvement: selection of required annotation on map upload improved
* Bug fix: annotations for elements with mutation in name (like "BID (p15)")
weren't provided properly
* Bug fix: passwords in the configuration tab are hidden with '*'
* Bug fix: user has access to transparency level when creating custom semantic
view (without this parametere functionality was very difficult to use)
* Bug fix: loading invalid plugin doesn't render empty div anymore
* Bug fix: sorting of custom overlays was broken when description of overlay
was present
* Bug fix: when there is a problem with adjusting font in complexes (because
the font should be smaller than 1pt) description is not drawn anymore
* Bug fix: going to export page and back was breaking a map
* Bug fix: coordinates of selected area wasn't processed properly when they
exceeded canvas
* Bug fix: postgres migration script fixed to work with new docker compose
* Bug fix: double click on user add button disabled
* Bug fix: privileges are mirrored correctly across different popups
* Bug fix: plugin tab css fixed
* Bug fix: uploading sbml file with no ids in glyphs returned error that
could not be easily understand
* Bug fix: ds_store files in subfolders crashed zip upload
* Bug fix: when creating new user default privileges were not filled
-- Piotr Gawron <piotr.gawron@uni.lu> Fri, 03 Aug 2018 10:00:00 +0200
-- Piotr Gawron <piotr.gawron@uni.lu> Mon, 29 Oct 2018 13:00:00 +0200
minerva (12.0.4) stable; urgency=medium
* Bug fix: CellDesigner modifications that are drawn as reaction are handled