Fix jar build

web/src/main/java/lcsb/mapviewer/web/api/project/NewProjectController.java

 package lcsb.mapviewer.web.api.project;
 
-import lcsb.mapviewer.annotation.data.MeSH;
-import lcsb.mapviewer.annotation.services.TaxonomySearchException;
-import lcsb.mapviewer.annotation.services.annotators.AnnotatorException;
 import lcsb.mapviewer.api.OperationNotAllowedException;
 import lcsb.mapviewer.api.QueryException;
 import lcsb.mapviewer.api.minervanet.MinervaNetController;
-import lcsb.mapviewer.common.Pair;
-import lcsb.mapviewer.model.MinervaEntity;
 import lcsb.mapviewer.model.Project;
 import lcsb.mapviewer.model.job.MinervaJob;
 import lcsb.mapviewer.model.security.Privilege;
@@ -24,7 +19,6 @@ import lcsb.mapviewer.services.interfaces.IProjectService;
 import lcsb.mapviewer.services.interfaces.ITaxonomyService;
 import lcsb.mapviewer.services.interfaces.IUserService;
 import lcsb.mapviewer.web.api.NewApiResponseSerializer;
-import lcsb.mapviewer.web.api.ResponseDecorator;
 import lcsb.mapviewer.web.api.user.NewUserLoginDTO;
 import org.apache.logging.log4j.LogManager;
 import org.apache.logging.log4j.Logger;
@@ -92,61 +86,12 @@ public class NewProjectController {
     this.taxonomyService = taxonomyService;
   }
 
-
-  private final ResponseDecorator projectResponseDecorator = new ResponseDecorator() {
-
-    @Override
-    public List<Pair<String, Object>> getDecoratedValuesForRaw(final Object object) {
-      return new ArrayList<>();
-    }
-
-    @Override
-    public List<Pair<String, Object>> getDecoratedValues(final MinervaEntity object) {
-      final List<Pair<String, Object>> result = new ArrayList<>();
-      if (object instanceof Project) {
-        final Project project = (Project) object;
-        String diseaseName = null;
-        if (project.getDisease() != null) {
-          final MeSH mesh;
-          try {
-            mesh = meshService.getMesh(project.getDisease());
-            if (mesh != null) {
-              diseaseName = mesh.getName();
-            }
-          } catch (final AnnotatorException e) {
-            logger.error("Problem with mesh", e);
-          }
-        }
-        String organismName = null;
-        if (project.getOrganism() != null) {
-          try {
-            organismName = taxonomyService.getNameForTaxonomy(project.getOrganism());
-          } catch (final TaxonomySearchException e) {
-            logger.error("Problem with taxonomy", e);
-          }
-        }
-
-        boolean sharedInMinervaNet = false;
-        try {
-          sharedInMinervaNet = minervaNetController.getSharedProjects().contains(project.getProjectId());
-        } catch (final Exception e) {
-          logger.error("Problem with minerva net", e);
-        }
-
-        result.add(new Pair<String, Object>("sharedInMinervaNet", sharedInMinervaNet));
-        result.add(new Pair<String, Object>("diseaseName", diseaseName));
-        result.add(new Pair<String, Object>("organismName", organismName));
-      }
-      return result;
-    }
-  };
-
   @PreAuthorize("hasAnyAuthority('IS_ADMIN', 'READ_PROJECT:' + #projectId)")
   @GetMapping(value = "/{projectId:.+}")
   public ResponseEntity<?> getProject(final @NotBlank @PathVariable(value = "projectId") String projectId)
       throws ObjectNotFoundException, FailedDependencyException, IOException {
     final Project project = projectService.getProjectByProjectId(projectId, true);
-    return serializer.prepareResponse(project, new ProjectResponseDecorator(minervaNetController.getSharedProjects()));
+    return serializer.prepareResponse(project, new ProjectResponseDecorator(minervaNetController.getSharedProjects(), meshService, taxonomyService));
   }
 
   @PreAuthorize("hasAnyAuthority('IS_ADMIN', 'IS_CURATOR')")
@@ -186,7 +131,7 @@ public class NewProjectController {
     projectService.update(project);
 
     project = projectService.getProjectByProjectId(projectId, true);
-    return serializer.prepareResponse(project, new ProjectResponseDecorator(minervaNetController.getSharedProjects()));
+    return serializer.prepareResponse(project, new ProjectResponseDecorator(minervaNetController.getSharedProjects(), meshService, taxonomyService));
   }
 
   @PreAuthorize("hasAuthority('IS_ADMIN')"
@@ -225,7 +170,7 @@ public class NewProjectController {
       projectFilter.put(ProjectProperty.PROJECT_ID, projectIds);
     }
     final Page<Project> projects = projectService.getAll(projectFilter, pageable);
-    return serializer.prepareResponse(projects, new ProjectResponseDecorator(minervaNetController.getSharedProjects()));
+    return serializer.prepareResponse(projects, new ProjectResponseDecorator(minervaNetController.getSharedProjects(), meshService, taxonomyService));
   }
 
   @PreAuthorize("hasAnyAuthority('IS_ADMIN')")
@@ -249,7 +194,7 @@ public class NewProjectController {
     projectService.update(project);
 
     project = projectService.getProjectByProjectId(projectId, true);
-    return serializer.prepareResponse(project, new ProjectResponseDecorator(minervaNetController.getSharedProjects()));
+    return serializer.prepareResponse(project, new ProjectResponseDecorator(minervaNetController.getSharedProjects(), meshService, taxonomyService));
   }
 
 }
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