issues that were discovered during biohackathon 2019 in Paris

pathvisio/src/main/java/lcsb/mapviewer/wikipathway/XML/ModelContructor.java

@@ -106,7 +106,7 @@ public class ModelContructor {
     if (type == null || type.equals("")) {
       type = null;
     }
-
+    
     if (type != null && type.equalsIgnoreCase("Metabolite")) {
       res = new SimpleMolecule(dataNode.getGraphId());
     } else if (type != null && type.equalsIgnoreCase("GeneProduct")) {
@@ -255,6 +255,7 @@ public class ModelContructor {
         if (mr != null) {
           mr.setIdModificationResidue(state.getGraphId());
           mr.setState(state.getType());
+          mr.setName(state.getTypeName());
 
           Double x = state.getRelX() * species.getWidth() / 2 + species.getCenterX();
           Double y = state.getRelY() * species.getHeight() / 2 + species.getCenterY();