Commits · e0d1c7951b52b03e0aa3909ed46e287330f89bbd · minerva / core · GitLab

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Feb 20, 2018
- various style checking warnings fixed · b746ebaa
  Piotr Gawron authored 7 years ago
  
  b746ebaa
Feb 15, 2018
- parsing of celldesigner reactions that are in fact modifiers supported · 29289000
  Piotr Gawron authored 7 years ago
  
  29289000
Feb 12, 2018
- info about constant, boundary cond is passed up properly · 2f2c79b8
  Piotr Gawron authored 7 years ago
  
  2f2c79b8
- fix on kinetics in reactions with complex modifiers · b5a4d8a7
  Piotr Gawron authored 7 years ago
  
  b5a4d8a7
- sbml function mathML is parsed properly · a3129c01
  Piotr Gawron authored 7 years ago
  
  a3129c01
- annotatio test files moved to converter · 79f18377
  Piotr Gawron authored 7 years ago
  
  79f18377
- xml parser moved to converter (so all converter have access to it) · 5f57c4bc
  Piotr Gawron authored 7 years ago
  
  5f57c4bc
- import export of sbml functions and parameters · f08cfc1e
  Piotr Gawron authored 7 years ago
  
  f08cfc1e
- simple export of reaction kinetics · db9da582
  Piotr Gawron authored 7 years ago
  
  db9da582
- kinetics equation can contain compartment id · 2d8b3e82
  Piotr Gawron authored 7 years ago
  
  2d8b3e82
- export of unit definition added · 6f235bae
  Piotr Gawron authored 7 years ago
  
  6f235bae
- export of kinetics to CellDeisgner added · 91632a3b
  Piotr Gawron authored 7 years ago
  
  91632a3b
- parsing of species kinetics parameters added · be3c8353
  Piotr Gawron authored 7 years ago
  
  be3c8353
- kinetics parser added · 9958d303
  Piotr Gawron authored 7 years ago
  
  9958d303
- support for SBML units and parameters added · 6ca6a3f5
  Piotr Gawron authored 7 years ago
  
  6ca6a3f5
- parser of sbml function · ae94a782
  Piotr Gawron authored 7 years ago
  
  ae94a782
- getModel method added to BioEntity · a7270a54
  Piotr Gawron authored 7 years ago
  
  a7270a54
- unit tests simplified using mockito · d74021c7
  Piotr Gawron authored 7 years ago
  
  d74021c7
- unit tests simplified · 838749dc
  Piotr Gawron authored 7 years ago
  
  838749dc
- when no information about modifier is provided then Modulation is used as default · b5e0e7f2
  Piotr Gawron authored 7 years ago
  
  b5e0e7f2
- typos · c08fbd39
  Piotr Gawron authored 7 years ago
  
  c08fbd39
- sbml converter package · 0aaf789c
  Piotr Gawron authored 7 years ago
  
  basic parsing of compartments
  0aaf789c
- new line character switched to linux + typos fixed · 60cffa1d
  Piotr Gawron authored 7 years ago
  
  60cffa1d
Jan 25, 2018
- common getElement method added · 4cabe7e5
  Piotr Gawron authored 7 years ago
  
  4cabe7e5
Jan 23, 2018
- when search query in session data points to invalid model error is not thrown anymore · c59597d9
  Piotr Gawron authored 7 years ago
  
  c59597d9
Jan 10, 2018
- getting custom overlays is done in single sql query · c53e94cf
  Piotr Gawron authored 7 years ago
  
  c53e94cf
Nov 20, 2017
- string<->species mapping is case insensitive · fc0310de
  Piotr Gawron authored 7 years ago
  
  this is used by ColorSchemaReader
  fc0310de
- logging to file disabled for unit tests · f7933cb2
  Piotr Gawron authored 7 years ago
  
  f7933cb2
Oct 18, 2017
- unit test fixed (using linux-like paths) · 16ed8d86
  Piotr Gawron authored 7 years ago
  
  16ed8d86
Oct 17, 2017
- verify annotations dialog implemented · 389369e3
  Piotr Gawron authored 7 years ago
  
  389369e3
- user API for updating user privileges · 92c7804e
  Piotr Gawron authored 7 years ago
  
  92c7804e
Sep 26, 2017
- verify annotations dialog implemented · 1d1e8303
  Piotr Gawron authored 7 years ago
  
  1d1e8303
Sep 25, 2017
- build-deploy fixed on linux · aadf87c8
  Piotr Gawron authored 7 years ago
  
  aadf87c8
Aug 04, 2017
- missing folders added (With some stub files in them) · 6ca3d6cd
  Piotr Gawron authored 7 years ago
  
  6ca3d6cd
Jun 30, 2017
- rename parameter · 016cf90c
  Piotr Gawron authored 7 years ago
  
  016cf90c
Jun 28, 2017
- semantic zooming and hierarchy visualizaion are unified on the model level · 05944698
  Piotr Gawron authored 7 years ago
  
  05944698
- parent compartment is assigned properly when processing compartments · 31317384
  Piotr Gawron authored 7 years ago
  
  31317384
- unused imports removed · c280383a
  Piotr Gawron authored 7 years ago
  
  c280383a
Jun 26, 2017
- AnnotatedObject renamed to BioEntity · d09f5464
  Piotr Gawron authored 7 years ago
  
  d09f5464
Jun 20, 2017
- export to xml improved (additional field data added) · 37b3208f
  Piotr Gawron authored 7 years ago
  
  37b3208f