Commits · 38a94dbf0748c9488ef36464a66afc2acff69b04 · minerva / core · GitLab

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Feb 13, 2018
- colorSchema simplified - it contains set of miriam data extracted from user... · 38a94dbf
  Piotr Gawron authored 7 years ago
  
  colorSchema simplified - it contains set of miriam data extracted from user input insted of preparsed information
  38a94dbf
- request an account uses default content from congfiguration · a2c94d68
  Piotr Gawron authored 7 years ago
  
  a2c94d68
- parameter for request account email content · f3511c8a
  Piotr Gawron authored 7 years ago
  
  f3511c8a
- parameter allowing to change admin the opacity · 5d3d5961
  Piotr Gawron authored 7 years ago
  
  5d3d5961
Feb 12, 2018
- unit tests fixed (model cannot contain reactions with the same id) · 1331ea0a
  Piotr Gawron authored 7 years ago
  
  1331ea0a
- info abot const, boundarycond is passed properly via api · 8055c151
  Piotr Gawron authored 7 years ago
  
  8055c151
- sbml function mathML is parsed properly · a3129c01
  Piotr Gawron authored 7 years ago
  
  a3129c01
- configuration returns information about unit types · ad9c2a5c
  Piotr Gawron authored 7 years ago
  
  ad9c2a5c
- rest API for units · 76e497fd
  Piotr Gawron authored 7 years ago
  
  76e497fd
- rest API for sbml functions · cdf52aec
  Piotr Gawron authored 7 years ago
  
  cdf52aec
- rest api for sbml functions · a046d06b
  Piotr Gawron authored 7 years ago
  
  a046d06b
- unit tests fixed - it's not allowed to have reactions with the same id in the model · dba2e36a
  Piotr Gawron authored 7 years ago
  
  dba2e36a
- copying kinetics shouldn't copy elements · 2e358315
  Piotr Gawron authored 7 years ago
  
  2e358315
- new constructors added (with reaction id arg) · 1a11a841
  Piotr Gawron authored 7 years ago
  
  1a11a841
- copying of model includes information about kinetics, functions, parameters · d2c2cd10
  Piotr Gawron authored 7 years ago
  
  d2c2cd10
- persistence annotations added · 8be2e056
  Piotr Gawron authored 7 years ago
  
  8be2e056
- import export of sbml functions and parameters · f08cfc1e
  Piotr Gawron authored 7 years ago
  
  f08cfc1e
- forbid adding reactions with the same id · 1a8bfef7
  Piotr Gawron authored 7 years ago
  
  1a8bfef7
- allow to remove element · 51377a45
  Piotr Gawron authored 7 years ago
  
  51377a45
- reaction comparator use new collection set comaprator · 0c049f2c
  Piotr Gawron authored 7 years ago
  
  0c049f2c
- simple export of reaction kinetics · db9da582
  Piotr Gawron authored 7 years ago
  
  db9da582
- kinetics equation can contain compartment id · 2d8b3e82
  Piotr Gawron authored 7 years ago
  
  2d8b3e82
- comparator of model includes functions, parameters, units · 62c58a17
  Piotr Gawron authored 7 years ago
  
  62c58a17
- export of kinetics to CellDeisgner added · 91632a3b
  Piotr Gawron authored 7 years ago
  
  91632a3b
- parsing of species kinetics parameters added · be3c8353
  Piotr Gawron authored 7 years ago
  
  be3c8353
- kinetics comparators · d40b3f05
  Piotr Gawron authored 7 years ago
  
  d40b3f05
- comparators refactored - common functionality extracted to abstract class · 1afa2c3a
  Piotr Gawron authored 7 years ago
  
  1afa2c3a
- kinetics parser added · 9958d303
  Piotr Gawron authored 7 years ago
  
  9958d303
- support for SBML units and parameters added · 6ca6a3f5
  Piotr Gawron authored 7 years ago
  
  6ca6a3f5
- Model contain SbmlFunction collection · 7c4d21e2
  Piotr Gawron authored 7 years ago
  
  7c4d21e2
- export of sbml trigger is supported now · 565659de
  Piotr Gawron authored 7 years ago
  
  565659de
- export of reaction layout added · d5e5d509
  Piotr Gawron authored 7 years ago
  
  d5e5d509
- export of sbml reaction without layout · 836994f3
  Piotr Gawron authored 7 years ago
  
  836994f3
- simple layout algorithm implemented · 156a4eae
  Piotr Gawron authored 7 years ago
  
  156a4eae
- getModel method added to BioEntity · a7270a54
  Piotr Gawron authored 7 years ago
  
  a7270a54
- when mix of layouted and non layouted elements is found, nonlayouted elements... · 993a6c4d
  Piotr Gawron authored 7 years ago
  
  when mix of layouted and non layouted elements is found, nonlayouted elements are put below the layout
  993a6c4d
- unit tests simplified using mockito · d74021c7
  Piotr Gawron authored 7 years ago
  
  d74021c7
- unit tests simplified · 838749dc
  Piotr Gawron authored 7 years ago
  
  838749dc
- when no information about modifier is provided then Modulation is used as default · b5e0e7f2
  Piotr Gawron authored 7 years ago
  
  b5e0e7f2
- sbml parser adds proper arrows for reactions without layout · cb30cb0b
  Piotr Gawron authored 7 years ago
  
  cb30cb0b