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Commit facee5d9 authored by Piotr Gawron's avatar Piotr Gawron
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data about modifications from rest aPI is taken into account

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1 merge request!68Resolve "Modification of proteins are not displayed"
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frontend-js/src/main/js/Configuration.js
+ 22
− 0
View file @ facee5d9
...@@ -6,6 +6,7 @@ var logger = require('./logger'); ...@@ -6,6 +6,7 @@ var logger = require('./logger');
var ConfigurationType = require('./ConfigurationType'); var ConfigurationType = require('./ConfigurationType');
var MiriamType = require('./map/data/MiriamType'); var MiriamType = require('./map/data/MiriamType');
var ModificationStateType = require('./map/data/ModificationStateType');
function Configuration(json) { function Configuration(json) {
var self = this; var self = this;
...@@ -46,6 +47,7 @@ function Configuration(json) { ...@@ -46,6 +47,7 @@ function Configuration(json) {
self.setElementTypes(json.elementTypes); self.setElementTypes(json.elementTypes);
self.setReactionTypes(json.reactionTypes); self.setReactionTypes(json.reactionTypes);
self.setMiriamTypes(json.miriamTypes); self.setMiriamTypes(json.miriamTypes);
self.setModificationStateTypes(json.modificationStateTypes);
} }
Configuration.prototype.setOption = function(type, value) { Configuration.prototype.setOption = function(type, value) {
...@@ -110,4 +112,24 @@ Configuration.prototype.getMiriamTypeByName = function(name) { ...@@ -110,4 +112,24 @@ Configuration.prototype.getMiriamTypeByName = function(name) {
return null; return null;
}; };
Configuration.prototype.setModificationStateTypes = function(modificationStateTypes) {
this._modificationStateTypes = [];
for ( var key in modificationStateTypes) {
if (modificationStateTypes.hasOwnProperty(key)) {
var typeData = modificationStateTypes[key];
this._modificationStateTypes.push(new ModificationStateType(typeData, key));
}
}
};
Configuration.prototype.getModificationStateTypeByName = function(name) {
var self = this;
for (var i = 0; i < self._modificationStateTypes.length; i++) {
var modificationStateType = self._modificationStateTypes[i];
if (modificationStateType.getName() === name) {
return modificationStateType;
}
}
return null;
};
module.exports = Configuration; module.exports = Configuration;
frontend-js/src/main/js/map/data/ModificationStateType.js 0 → 100644
+ 42
− 0
View file @ facee5d9
"use strict";
var ObjectWithListeners = require('../../ObjectWithListeners');
function ModificationStateType(data, name) {
// call super constructor
ObjectWithListeners.call(this);
var self = this;
self.setAbbreviation(data.abbreviation);
self.setName(name);
self.setCommonName(data.commonName);
}
ModificationStateType.prototype = Object.create(ObjectWithListeners.prototype);
ModificationStateType.prototype.constructor = ModificationStateType;
ModificationStateType.prototype.setName = function(name) {
this._name = name;
};
ModificationStateType.prototype.getName = function() {
return this._name;
};
ModificationStateType.prototype.setAbbreviation= function(abbreviation) {
this._abbreviation = abbreviation;
};
ModificationStateType.prototype.getAbbreviation = function() {
return this._abbreviation;
};
ModificationStateType.prototype.setCommonName = function(commonName) {
this._commonName = commonName;
};
ModificationStateType.prototype.getCommonName = function() {
return this._commonName;
};
module.exports = ModificationStateType;
frontend-js/testFiles/apiCalls/configuration/token=MOCK_TOKEN_ID&
+ 1
− 1
View file @ facee5d9
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