ci job for checking CHANGELOG spelling

.aspell.en.pws

+personal_ws-1.1 en 0 utf-8
+Aceview
+Affymetrix
+AFTOL
+allel
+Allergome
+AmoebaDB
+Analyte
+antisense
+AntWeb
+APD
+AphidBase
+api
+ArachnoServer
+ARITOX
+ArrayExpress
+arXiv
+AspGD
+ATCC
+AutDB
+AUTH
+autocomplete
+autofill
+BackgroundColor
+BacMap
+BBD
+bcrypt
+BDGP
+BeetleBase
+BEVASIRANIB
+Bgee
+BiGG
+BindingDB
+bioassay
+BioCarta
+BioCatalogue
+BioCompendium
+BioCyc
+bioEntities
+BioEntity
+BioGRID
+BioNumbers
+biopax
+BioPortal
+BioProject
+BioSample
+BioSystems
+Biotransformation
+BitterDB
+BOM
+boolean
+BorderColor
+bqbiol
+bqmodel
+BugBase
+BYKdb
+capslock
+cardinality
+CATH
+CAZy
+CellDesigner
+CGSC
+CharProt
+charset
+CHEBI
+checkboxes
+chembl
+ChemDB
+ChemIDplus
+CLDB
+ClinicalTrials
+ClinVar
+compartmentRef
+Compulyeast
+Concurent
+config
+Conoserver
+contect
+contentType
+coords
+COPASI
+Coriell
+CORS
+CORUM
+cron
+CryptoDB
+CSA
+css
+CTD
+ctdbase
+CutDB
+CVE
+DailyMed
+DAPI
+DARC
+DataBase
+dataset
+datasets
+DATF
+dbconfig
+DBD
+dbEST
+DBG
+dbProbe
+dbSNP
+debian
+defaultCenterX
+defaultCenterY
+defaultZoomLevel
+Degradome
+DEPOD
+dialogs
+Dictybase
+DisProt
+DMET
+DOI
+DOMMINO
+DORLIMOMAB
+DPV
+DragonDB
+DRSC
+DrugBank
+ds
+EchoBASE
+EcoGene
+EcoliWiki
+eggNOG
+elementIdentifier
+ENA
+Ensembl
+Entrez
+enviPath
+Environ
+EPD
+ExAC
+Expt
+FlyBase
+FMA
+FooDB
+frontend
+FuncBase
+FungiDB
+GABI
+Gawron
+GC
+Genatlas
+GeneCards
+GeneDB
+GeneFarm
+geneMappingId
+GeneTree
+genomeId
+genomic
+GenPept
+getWriter
+GiardiaDB
+GLIDA
+Glycan
+GlycoEpitope
+GlycomeDB
+glyphs
+Golm
+GPCR
+GPCRDB
+GPML
+Gramene
+graphicalObject
+GreenGenes
+GRSDB
+GWAS
+GXA
+HAMAP
+hasInstance
+hasProperty
+hasTaxon
+HCVDB
+heterodimer
+HGMD
+HGNC
+Hikari
+HLA
+HOGENOM
+HOMD
+Homeodomain
+HomoloGene
+homomultimer
+HOVERGEN
+HPA
+HPRD
+HSSP
+html
+http
+https
+hungs
+ICD
+ICEberg
+IMEx
+IMGT
+InChI
+InChIKey
+includedCompartmentIds
+InfoWindow
+IntAct
+Intron
+Introns
+InvDb
+IRD
+iRefWeb
+isDerivedFrom
+ISFinder
+isInstanceOf
+isPropertyOf
+ISSN
+IUPHAR
+javascript
+JAX
+JCGGDB
+jpg
+JS
+json
+JSTOR
+JWS
+Kegg
+KEGG
+KiSAO
+KNApSAcK
+LayerText
+layouted
+LDAP
+leprae
+ligand
+LigandBox
+LIGM
+LINCS
+lineWidth
+LipidBank
+logrotate
+MACiE
+MaizeGDB
+mapId
+marinum
+MassBank
+MatrixDB
+md
+MedlinePlus
+MEROPS
+MetaboLights
+Metabolome
+Metagenome
+Metainformation
+MetaNetX
+Metazoa
+METLIN
+MGED
+MicrosporidiaDB
+MimoDB
+minerva
+MIPModDB
+mirEX
+miriam
+MiRNA
+MiRNAs
+miRNEST
+mirtarbase
+misalign
+misaligning
+MMRRC
+ModelDB
+MolArt
+Molbase
+multimer
+multimers
+MycoBank
+MycoBrowser
+NADH
+NameBank
+NAPP
+NARCIS
+NASC
+NCBI
+NCI
+NCIm
+NCIt
+NeuroLex
+NeuroMorpho
+NeuronDB
+NEXTDB
+nextProt
+NIAEST
+NITE
+NONCODE
+NORINE
+NucleaRDB
+occursIn
+OMA
+OMIA
+openjdk
+OpenLayers
+OPM
+ORCID
+OriDB
+Orphanet
+OrthoDB
+Oryza
+Oryzabase
+overlayed
+PaleoDB
+parseable
+PATO
+PaxDb
+Pazar
+pdf
+PDR
+PeptideAtlas
+Peroxibase
+PharmGKB
+phenome
+phentoype
+phenotypes
+PhosphoPoint
+Phosphoprotein
+PhosphoSite
+PhylomeDB
+Phytozome
+PINA
+Piotr
+PiroplasmaDB
+PIRSF
+PlasmoDB
+PMC
+pmceurope
+PMP
+png
+Pocketome
+PolBase
+PomBase
+postgres
+postgresql
+posttranslational
+PredictProtein
+Probeset
+ProDom
+ProGlycProt
+projectId
+PROSITE
+ProtClustDB
+ProteinCard
+Proteome
+ProteomicsDB
+Protists
+ProtoNet
+PSCDB
+Pseudomonas
+PubChem
+pubmed
+px
+qTL
+QTL
+RDF
+reactionId
+reactionIdentifier
+reactome
+REBASE
+removeAllListeners
+reportable
+repositioned
+RESID
+resizeable
+reupload
+revalidated
+reverseReaction
+RFAM
+RGD
+RHOA
+RK
+RNAi
+RNAs
+RoundedRectangle
+SABIO
+Saccharomyces
+SBGN
+SBGNML
+SBML
+SBO
+ScerTF
+Schizosaccharomyces
+SCOP
+scrollbar
+scrollbars
+SearchListener
+selectable
+SemanticZoomLevelTransparency
+ShapeType
+SIDER
+SitEx
+smegmatis
+SMTP
+SNOMED
+SNP
+sortable
+SoyBase
+specific
+speciesReference
+SSL
+STAP
+subfolders
+submap
+submaps
+submodel
+submodels
+substanceUnits
+SubstrateDB
+SubtiList
+SubtiWiki
+superfamily
+SUPFAM
+svg
+SwissLipids
+symlink
+Tair
+TAIR
+TarBase
+targetting
+Taxnomy
+Tetrahymena
+TFDB
+TIGRFAMS
+timeouted
+TOPDB
+TopFind
+ToS
+ToxoDB
+TransparencyZoomLevelVisibility
+TreeBASE
+TreeFam
+TrichDB
+TriTrypDB
+TTD
+txt
+UBERON
+uBio
+ubuntu
+uid
+un
+unhandled
+unicode
+UNII
+Unimod
+UniParc
+UniPathway
+UniProt
+UniSTS
+uri
+url
+urlencoded
+urls
+USPTO
+UTF
+VariO
+Vbase
+VBRC
+Vetinary
+VFDB
+viewBox
+ViralZone
+VIRsiRNA
+vmh
+webpage
+whitespace
+WikiGenes
+Worfdb
+WormBase
+Wormpep
+www
+Xenbase
+xml
+xsd
+xss
+YDPM
+YeTFasCo
+YRC
+ZFIN

.gitlab-ci.yml

@@ -589,3 +589,8 @@ test_postgres_14_compatibility:
   <<: *test_database_definition
   services:
     - postgres:14
+
+changelog_spelling:
+   stage: test
+   script:
+      - sh test_spelling.sh

test_spelling.sh

+#!/bin/bash
+lines=`cat CHANGELOG | aspell --lang=en --encoding=utf-8 --add-extra-dicts=./.aspell.en.pws list|wc -l`
+if [ $lines -ne 0 ]
+then
+  echo "Unknown words:"
+  echo
+  cat CHANGELOG | aspell --lang=en --encoding=utf-8 --add-extra-dicts=./.aspell.en.pws list
+  exit 1
+fi
+

web/pom.xml

-<project xmlns="http://maven.apache.org/POM/4.0.0"
-	xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance"
-	xsi:schemaLocation="http://maven.apache.org/POM/4.0.0 
+<project xmlns="http://maven.apache.org/POM/4.0.0" xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:schemaLocation="http://maven.apache.org/POM/4.0.0 
 		http://maven.apache.org/xsd/maven-4.0.0.xsd">
 
 	<modelVersion>4.0.0</modelVersion>
@@ -71,14 +69,14 @@
 		</dependency>
 
 		<dependency>
-		   <groupId>javax.el</groupId>
-		   <artifactId>javax.el-api</artifactId>
-		   <version>${el.version}</version>
+			<groupId>javax.el</groupId>
+			<artifactId>javax.el-api</artifactId>
+			<version>${el.version}</version>
 		</dependency>
 		<dependency>
-		   <groupId>org.glassfish.web</groupId>
-		   <artifactId>javax.el</artifactId>
-		   <version>${el.version}</version>
+			<groupId>org.glassfish.web</groupId>
+			<artifactId>javax.el</artifactId>
+			<version>${el.version}</version>
 		</dependency>
 
 		<dependency>
@@ -374,8 +372,8 @@
 							<directory>${project.basedir}/../</directory>
 							<targetPath>.</targetPath>
 							<includes>
-                <include>CHANGELOG</include>
-              </includes>
+								<include>CHANGELOG</include>
+							</includes>
 						</resource>
 					</webResources>
 					<archive>
@@ -442,6 +440,29 @@
 				</configuration>
 			</plugin>
 
+
+			<plugin>
+				<groupId>org.jboss.maven.plugins</groupId>
+				<artifactId>maven-spellChecker-plugin</artifactId>
+				<version>1.2-SNAPSHOT</version>
+				<executions>
+					<execution>
+						<id>spellChecker:check</id>
+						<phase>package</phase>
+						<goals>
+							<goal>check</goal>
+						</goals>
+					</execution>
+				</executions>
+				<configuration>
+					<outputDir>${project.build.directory}/log</outputDir>
+					<reportFileName>log.txt</reportFileName>
+					<dirForScan>${project.basedir}</dirForScan>
+					<includes>
+						<include>CHANGELOG</include>
+					</includes>
+				</configuration>
+			</plugin>
 		</plugins>
 	</build>