reactome refactor and tests done (c406fa56) · Commits · minerva / core

Commit c406fa56 authored 8 years ago by piotr.gawron

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reactome refactor and tests done

parent 27e18a41

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reactome/src/main/java/lcsb/mapviewer/reactome/utils/DataFormatter.java 195 additions, 194 deletions

...ain/java/lcsb/mapviewer/reactome/utils/DataFormatter.java
reactome/src/main/java/lcsb/mapviewer/reactome/utils/ElementUtil.java 10 additions, 5 deletions

.../main/java/lcsb/mapviewer/reactome/utils/ElementUtil.java
reactome/src/main/java/lcsb/mapviewer/reactome/utils/ReactionComparator.java 190 additions, 189 deletions

...ava/lcsb/mapviewer/reactome/utils/ReactionComparator.java
reactome/src/main/java/lcsb/mapviewer/reactome/utils/ReactomeQueryUtil.java 842 additions, 829 deletions

...java/lcsb/mapviewer/reactome/utils/ReactomeQueryUtil.java
reactome/src/main/java/lcsb/mapviewer/reactome/utils/comparators/ANodeComparator.java 19 additions, 12 deletions

...mapviewer/reactome/utils/comparators/ANodeComparator.java
reactome/src/main/java/lcsb/mapviewer/reactome/utils/comparators/ComplexAndCandidateSetComparator.java 9 additions, 9 deletions

...e/utils/comparators/ComplexAndCandidateSetComparator.java
reactome/src/main/java/lcsb/mapviewer/reactome/utils/comparators/ComplexAndCatalystComparator.java 45 additions, 42 deletions

...ctome/utils/comparators/ComplexAndCatalystComparator.java
reactome/src/main/java/lcsb/mapviewer/reactome/utils/comparators/ComplexAndComplexComparator.java 49 additions, 48 deletions

...actome/utils/comparators/ComplexAndComplexComparator.java
reactome/src/main/java/lcsb/mapviewer/reactome/utils/comparators/ComplexAndDefinedSetComparator.java 9 additions, 9 deletions

...ome/utils/comparators/ComplexAndDefinedSetComparator.java
reactome/src/main/java/lcsb/mapviewer/reactome/utils/comparators/ComplexAndEntityWithAccessionedSequenceComparator.java 60 additions, 58 deletions

...rs/ComplexAndEntityWithAccessionedSequenceComparator.java
reactome/src/main/java/lcsb/mapviewer/reactome/utils/comparators/ComplexAndOtherEntityComparator.java 9 additions, 9 deletions

...me/utils/comparators/ComplexAndOtherEntityComparator.java
reactome/src/main/java/lcsb/mapviewer/reactome/utils/comparators/ComplexAndSimpleEntityComparator.java 64 additions, 63 deletions

...e/utils/comparators/ComplexAndSimpleEntityComparator.java
reactome/src/main/java/lcsb/mapviewer/reactome/utils/comparators/DegradedAndEntityWithAccessionedSequenceComparator.java 23 additions, 21 deletions

...s/DegradedAndEntityWithAccessionedSequenceComparator.java
reactome/src/main/java/lcsb/mapviewer/reactome/utils/comparators/DrugAndCatalystComparator.java 35 additions, 34 deletions

...reactome/utils/comparators/DrugAndCatalystComparator.java
reactome/src/main/java/lcsb/mapviewer/reactome/utils/comparators/GeneAndDefinedSetComparator.java 10 additions, 10 deletions

...actome/utils/comparators/GeneAndDefinedSetComparator.java
reactome/src/main/java/lcsb/mapviewer/reactome/utils/comparators/GeneAndOtherEntityComparator.java 8 additions, 8 deletions

...ctome/utils/comparators/GeneAndOtherEntityComparator.java
reactome/src/main/java/lcsb/mapviewer/reactome/utils/comparators/IonAndCatalystComparator.java 46 additions, 45 deletions

.../reactome/utils/comparators/IonAndCatalystComparator.java
reactome/src/main/java/lcsb/mapviewer/reactome/utils/comparators/IonAndComplexComparator.java 4 additions, 3 deletions

...r/reactome/utils/comparators/IonAndComplexComparator.java
reactome/src/main/java/lcsb/mapviewer/reactome/utils/comparators/IonAndDefinedSetComparator.java 46 additions, 45 deletions

...eactome/utils/comparators/IonAndDefinedSetComparator.java
reactome/src/main/java/lcsb/mapviewer/reactome/utils/comparators/IonAndEntityWithAccessionedSequenceComparator.java 28 additions, 27 deletions

...rators/IonAndEntityWithAccessionedSequenceComparator.java

with 1701 additions and 1660 deletions

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