Merge branch '572-add-support-for-modifications-and-states-in-sbml-export-import' into 'master' (b59a2c90) · Commits · minerva / core

Commit b59a2c90 authored 6 years ago by Piotr Gawron

Merge branch '572-add-support-for-modifications-and-states-in-sbml-export-import' into 'master'

Resolve "add support for modifications and states in sbml export/import"

Closes #572

See merge request !560

parents 8611235f dc5b9db3

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commons/pom.xml 5 additions, 0 deletions

commons/pom.xml
commons/src/main/java/lcsb/mapviewer/common/Comparator.java 1 addition, 0 deletions

commons/src/main/java/lcsb/mapviewer/common/Comparator.java
commons/src/main/java/lcsb/mapviewer/common/XmlParser.java 2 additions, 2 deletions

commons/src/main/java/lcsb/mapviewer/common/XmlParser.java
converter-CellDesigner/src/main/java/lcsb/mapviewer/converter/model/celldesigner/structure/CellDesignerAntisenseRna.java 18 additions, 2 deletions

...odel/celldesigner/structure/CellDesignerAntisenseRna.java
converter-CellDesigner/src/main/java/lcsb/mapviewer/converter/model/celldesigner/structure/CellDesignerCompartment.java 0 additions, 4 deletions

...model/celldesigner/structure/CellDesignerCompartment.java
converter-CellDesigner/src/main/java/lcsb/mapviewer/converter/model/celldesigner/structure/CellDesignerElement.java 0 additions, 2 deletions

...ter/model/celldesigner/structure/CellDesignerElement.java
converter-CellDesigner/src/main/java/lcsb/mapviewer/converter/model/celldesigner/structure/CellDesignerGene.java 27 additions, 3 deletions

...verter/model/celldesigner/structure/CellDesignerGene.java
converter-CellDesigner/src/main/java/lcsb/mapviewer/converter/model/celldesigner/structure/CellDesignerProtein.java 15 additions, 3 deletions

...ter/model/celldesigner/structure/CellDesignerProtein.java
converter-CellDesigner/src/main/java/lcsb/mapviewer/converter/model/celldesigner/structure/CellDesignerRna.java 17 additions, 3 deletions

...nverter/model/celldesigner/structure/CellDesignerRna.java
converter-CellDesigner/src/main/java/lcsb/mapviewer/converter/model/celldesigner/structure/CellDesignerSpecies.java 0 additions, 1 deletion

...ter/model/celldesigner/structure/CellDesignerSpecies.java
converter-CellDesigner/src/test/java/lcsb/mapviewer/converter/model/celldesigner/CellDesignerXmlParserTest.java 1 addition, 2 deletions

...nverter/model/celldesigner/CellDesignerXmlParserTest.java
converter-CellDesigner/src/test/java/lcsb/mapviewer/converter/model/celldesigner/species/GeneXmlParserTest.java 1 addition, 1 deletion

...nverter/model/celldesigner/species/GeneXmlParserTest.java
converter-CellDesigner/src/test/java/lcsb/mapviewer/converter/model/celldesigner/structure/SpeciesStateTest.java 2 additions, 2 deletions

...verter/model/celldesigner/structure/SpeciesStateTest.java
converter-SBGNML/src/main/java/lcsb/mapviewer/converter/model/sbgnml/SbgnmlXmlConverter.java 2 additions, 2 deletions

.../mapviewer/converter/model/sbgnml/SbgnmlXmlConverter.java
converter-SBGNML/src/main/java/lcsb/mapviewer/converter/model/sbgnml/SbgnmlXmlParser.java 1 addition, 1 deletion

...csb/mapviewer/converter/model/sbgnml/SbgnmlXmlParser.java
converter-SBGNML/src/test/java/lcsb/mapviewer/converter/model/sbgnml/SbgnmlXmlParserTest2.java 1 addition, 1 deletion

...apviewer/converter/model/sbgnml/SbgnmlXmlParserTest2.java
converter-graphics/src/test/java/lcsb/mapviewer/converter/graphics/bioEntity/element/species/SpeciesConverterTest.java 1 addition, 1 deletion

...phics/bioEntity/element/species/SpeciesConverterTest.java
converter-sbml/pom.xml 7 additions, 1 deletion

converter-sbml/pom.xml
converter-sbml/src/main/java/lcsb/mapviewer/converter/model/sbml/NotesUtility.java 63 additions, 0 deletions

...ava/lcsb/mapviewer/converter/model/sbml/NotesUtility.java
converter-sbml/src/main/java/lcsb/mapviewer/converter/model/sbml/SbmlBioEntityExporter.java 72 additions, 25 deletions

...mapviewer/converter/model/sbml/SbmlBioEntityExporter.java

with 236 additions and 56 deletions

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