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Commit a29e4489 authored by Piotr Gawron's avatar Piotr Gawron
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change in reactome database

parent 7d2837a6
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3 merge requests!716Merge 12.2.0,!715merge 12.2.0,!714V12.2 release
Pipeline #9470 passed
...@@ -53,7 +53,7 @@ public class ReactomeReferenceGeneProductParserTest extends ReactomeTestFunction ...@@ -53,7 +53,7 @@ public class ReactomeReferenceGeneProductParserTest extends ReactomeTestFunction
assertEquals((Integer) 2, res.getReferenceDatabase().getDbId()); assertEquals((Integer) 2, res.getReferenceDatabase().getDbId());
assertEquals((Integer) 48895, res.getSpecies().getDbId()); assertEquals((Integer) 48895, res.getSpecies().getDbId());
assertEquals((Integer) 11373937, res.getReferenceGenes().get(0).getDbId()); assertEquals((Integer) 10586616, res.getReferenceGenes().get(0).getDbId());
} catch (Exception e) { } catch (Exception e) {
e.printStackTrace(); e.printStackTrace();
......
...@@ -39,7 +39,7 @@ public class ReactomeReferenceIsoformParserTest extends ReactomeTestFunctions { ...@@ -39,7 +39,7 @@ public class ReactomeReferenceIsoformParserTest extends ReactomeTestFunctions {
assertEquals((Integer) 2, res.getReferenceDatabase().getDbId()); assertEquals((Integer) 2, res.getReferenceDatabase().getDbId());
assertEquals("false", res.getIsSequenceChanged()); assertEquals("false", res.getIsSequenceChanged());
assertEquals((Integer) 48887, res.getSpecies().getDbId()); assertEquals((Integer) 48887, res.getSpecies().getDbId());
assertEquals((Integer) 11373937, res.getReferenceGenes().get(0).getDbId()); assertEquals((Integer) 10586616, res.getReferenceGenes().get(0).getDbId());
assertEquals((Integer) 192971, res.getReferenceTranscripts().get(0).getDbId()); assertEquals((Integer) 192971, res.getReferenceTranscripts().get(0).getDbId());
assertEquals((Integer) 402286, res.getIsoformParents().get(0).getDbId()); assertEquals((Integer) 402286, res.getIsoformParents().get(0).getDbId());
assertEquals("UniProt:P02545-1 LMNA", res.getDisplayName()); assertEquals("UniProt:P02545-1 LMNA", res.getDisplayName());
......
...@@ -20,7 +20,7 @@ ...@@ -20,7 +20,7 @@
<schemaClass>Species</schemaClass> <schemaClass>Species</schemaClass>
</species> </species>
<referenceGene> <referenceGene>
<dbId>11373937</dbId> <dbId>10586616</dbId>
<displayName>BioGPS Gene:1 A1BG</displayName> <displayName>BioGPS Gene:1 A1BG</displayName>
<schemaClass>ReferenceDNASequence</schemaClass> <schemaClass>ReferenceDNASequence</schemaClass>
</referenceGene> </referenceGene>
......
...@@ -382,7 +382,7 @@ ...@@ -382,7 +382,7 @@
<schemaClass>Species</schemaClass> <schemaClass>Species</schemaClass>
</species> </species>
<referenceGene> <referenceGene>
<dbId>11373937</dbId> <dbId>10586616</dbId>
<displayName>BioGPS Gene:1 A1BG</displayName> <displayName>BioGPS Gene:1 A1BG</displayName>
<schemaClass>ReferenceDNASequence</schemaClass> <schemaClass>ReferenceDNASequence</schemaClass>
</referenceGene> </referenceGene>
......
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