refactoring (654f4560) · Commits · minerva / core

Commit 654f4560 authored 8 years ago by piotr.gawron

refactoring

model-command, graphics and pathvisio converter in progress

parent af954491

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1 merge request!1Issue 37

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converter-graphics/src/main/java/lcsb/mapviewer/converter/graphics/compartment/CompartmentConverter.java 190 additions, 189 deletions

.../converter/graphics/compartment/CompartmentConverter.java
converter-graphics/src/main/java/lcsb/mapviewer/converter/graphics/species/AntisenseRnaConverter.java 141 additions, 141 deletions

...wer/converter/graphics/species/AntisenseRnaConverter.java
converter-graphics/src/main/java/lcsb/mapviewer/converter/graphics/species/ComplexConverter.java 8 additions, 9 deletions

...apviewer/converter/graphics/species/ComplexConverter.java
converter-graphics/src/main/java/lcsb/mapviewer/converter/graphics/species/GeneConverter.java 132 additions, 135 deletions

...b/mapviewer/converter/graphics/species/GeneConverter.java
converter-graphics/src/main/java/lcsb/mapviewer/converter/graphics/species/ProteinConverter.java 54 additions, 44 deletions

...apviewer/converter/graphics/species/ProteinConverter.java
converter-graphics/src/main/java/lcsb/mapviewer/converter/graphics/species/RnaConverter.java 144 additions, 146 deletions

...sb/mapviewer/converter/graphics/species/RnaConverter.java
converter-graphics/src/main/java/lcsb/mapviewer/converter/graphics/species/SBGNNucleicAcidFeatureConverter.java 124 additions, 126 deletions

...ter/graphics/species/SBGNNucleicAcidFeatureConverter.java
converter-graphics/src/main/java/lcsb/mapviewer/converter/graphics/species/SimpleMoleculeConverter.java 112 additions, 114 deletions

...r/converter/graphics/species/SimpleMoleculeConverter.java
converter-graphics/src/main/java/lcsb/mapviewer/converter/graphics/species/SpeciesConverter.java 2 additions, 5 deletions

...apviewer/converter/graphics/species/SpeciesConverter.java
converter-graphics/src/test/java/lcsb/mapviewer/converter/graphics/NormalImageGeneratorTest.java 0 additions, 3 deletions

...apviewer/converter/graphics/NormalImageGeneratorTest.java
converter-graphics/src/test/java/lcsb/mapviewer/converter/graphics/PdfImageGeneratorTest.java 0 additions, 1 deletion

...b/mapviewer/converter/graphics/PdfImageGeneratorTest.java
converter-graphics/src/test/java/lcsb/mapviewer/converter/graphics/placefinder/AllPlaceFinderTest.java 149 additions, 152 deletions

...er/converter/graphics/placefinder/AllPlaceFinderTest.java
converter-graphics/src/test/java/lcsb/mapviewer/converter/graphics/species/SpeciesConverterTest.java 11 additions, 10 deletions

...ewer/converter/graphics/species/SpeciesConverterTest.java
model-command/src/main/java/lcsb/mapviewer/commands/CopyCommand.java 0 additions, 63 deletions

...nd/src/main/java/lcsb/mapviewer/commands/CopyCommand.java
model-command/src/main/java/lcsb/mapviewer/commands/CreateHierarchyCommand.java 14 additions, 62 deletions

.../java/lcsb/mapviewer/commands/CreateHierarchyCommand.java
model-command/src/main/java/lcsb/mapviewer/commands/SubModelCommand.java 143 additions, 160 deletions

...rc/main/java/lcsb/mapviewer/commands/SubModelCommand.java
model-command/src/main/java/lcsb/mapviewer/commands/properties/RemoveElementFormerSymbolsCommand.java 75 additions, 75 deletions

...ommands/properties/RemoveElementFormerSymbolsCommand.java
model-command/src/main/java/lcsb/mapviewer/commands/properties/RemoveElementMiriamDataCommand.java 76 additions, 76 deletions

...r/commands/properties/RemoveElementMiriamDataCommand.java
model-command/src/main/java/lcsb/mapviewer/commands/properties/RemoveElementSynonymsCommand.java 75 additions, 75 deletions

...wer/commands/properties/RemoveElementSynonymsCommand.java
model-command/src/test/java/lcsb/mapviewer/commands/ColorModelCommandTest.java 2 additions, 3 deletions

...t/java/lcsb/mapviewer/commands/ColorModelCommandTest.java

with 1452 additions and 1589 deletions

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