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Commit 4e095216 authored by Piotr Gawron's avatar Piotr Gawron
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unit test checking if creation of chart for aliases is working

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2 merge requests!115Resolve "admin panel should use API",!114Resolve "admin panel should use API"
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frontend-js/.idea/workspace.xml
+ 159
− 104
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frontend-js/src/main/js/map/window/AliasInfoWindow.js
+ 1
− 1
View file @ 4e095216
......@@ -72,7 +72,7 @@ AliasInfoWindow.prototype.createChartDiv = function() {
var result = document.createElement("div");
var rows = [];
var self = this;
return Promise.each(this.layoutAliases, function(data, i) {
return Promise.each(self.layoutAliases, function(data, i) {
var rowDiv = document.createElement("div");
if (i % 2 === 0) {
rowDiv.className = "mapChartRowEvenDiv";
......
frontend-js/src/test/js/map/window/AliasInfoWindow-test.js
+ 111
− 84
View file @ 4e095216
"use strict";
require("../../mocha-config");
var Promise = require("bluebird");
var functions = require('../../../../main/js/Functions');
var Alias = require('../../../../main/js/map/data/Alias');
var LayoutAlias = require('../../../../main/js/map/data/LayoutAlias');
var Drug = require('../../../../main/js/map/data/Drug');
var AliasInfoWindow = require('../../../../main/js/map/window/AliasInfoWindow');
var IdentifiedElement = require('../../../../main/js/map/data/IdentifiedElement');
......@@ -14,9 +16,9 @@ var assert = require('assert');
var logger = require('../../logger');
describe('AliasInfoWindow', function() {
describe('constructor', function() {
it("default", function() {
describe('AliasInfoWindow', function () {
describe('constructor', function () {
it("default", function () {
var map = helper.createCustomMap();
var alias = helper.createAlias();
......@@ -26,8 +28,8 @@ describe('AliasInfoWindow', function() {
map.getModel().addAlias(alias);
var aliasWindow = new AliasInfoWindow({
alias : alias,
map : map
alias: alias,
map: map
});
assert.equal(alias, aliasWindow.getAlias());
......@@ -35,28 +37,28 @@ describe('AliasInfoWindow', function() {
assert.ok(aliasWindow.getContent().innerHTML.indexOf("loading") >= 0);
assert.equal(logger.getWarnings().length, 0);
});
it("loading data", function() {
it("loading data", function () {
var map = helper.createCustomMap();
map.getOverlayDataForAlias = function() {
map.getOverlayDataForAlias = function () {
return Promise.resolve([]);
};
var javaObject = {
bounds : {
x : 190,
y : 44,
width : 80,
height : 40
bounds: {
x: 190,
y: 44,
width: 80,
height: 40
},
modelId : map.getId(),
idObject : 30001
modelId: map.getId(),
idObject: 30001
};
var alias = new Alias(javaObject);
map.getModel().addAlias(alias);
var aliasWindow = new AliasInfoWindow({
alias : alias,
map : map
alias: alias,
map: map
});
assert.equal(alias, aliasWindow.alias);
......@@ -65,29 +67,29 @@ describe('AliasInfoWindow', function() {
});
});
it("createOverlayInfoDiv", function() {
it("createOverlayInfoDiv", function () {
var map = helper.createCustomMap();
var oc = helper.createDrugDbOverlay(map);
var alias = helper.createAlias(map);
var aliasWindow = new AliasInfoWindow({
alias : alias,
map : map
alias: alias,
map: map
});
oc.searchNamesByTarget = function() {
return Promise.resolve([ "xField" ]);
oc.searchNamesByTarget = function () {
return Promise.resolve(["xField"]);
};
oc.getElementsByQueryFromServer = function() {
return Promise.resolve([ new Drug({
name : "xField",
references : [],
targets : [],
}) ]);
oc.getElementsByQueryFromServer = function () {
return Promise.resolve([new Drug({
name: "xField",
references: [],
targets: [],
})]);
};
return oc.getDetailDataByIdentifiedElement(new IdentifiedElement(alias), true).then(function(data) {
return oc.getDetailDataByIdentifiedElement(new IdentifiedElement(alias), true).then(function (data) {
var overlayDiv = aliasWindow.createOverlayInfoDiv(oc, data);
assert.ok(functions.isDomElement(overlayDiv));
assert.ok(overlayDiv.innerHTML.indexOf('xField') >= 0);
......@@ -95,29 +97,29 @@ describe('AliasInfoWindow', function() {
});
it("createDrugOverlayInfoDiv", function() {
it("createDrugOverlayInfoDiv", function () {
helper.setUrl("http://test/?id=drug_target_sample");
var map, ie, aliasWindow, oc;
return ServerConnector.getProject().then(function(project) {
return ServerConnector.getProject().then(function (project) {
map = helper.createCustomMap(project);
oc = helper.createDrugDbOverlay(map);
ie = new IdentifiedElement({
id : 436152,
modelId : map.getId(),
type : "ALIAS"
id: 436152,
modelId: map.getId(),
type: "ALIAS"
});
return map.getModel().getByIdentifiedElement(ie, true);
}).then(function(alias) {
}).then(function (alias) {
aliasWindow = new AliasInfoWindow({
alias : alias,
map : map
alias: alias,
map: map
});
return oc.getDetailDataByIdentifiedElement(ie, true);
}).then(function(data) {
}).then(function (data) {
var overlayDiv = aliasWindow.createOverlayInfoDiv(oc, data);
assert.ok(functions.isDomElement(overlayDiv));
assert.ok(overlayDiv.innerHTML.indexOf('NADH') >= 0);
......@@ -125,33 +127,33 @@ describe('AliasInfoWindow', function() {
});
});
it("createChemicalOverlayInfoDiv", function() {
it("createChemicalOverlayInfoDiv", function () {
var map, ie, aliasWindow, oc;
return ServerConnector.getProject().then(function(project) {
return ServerConnector.getProject().then(function (project) {
map = helper.createCustomMap(project);
oc = helper.createChemicalDbOverlay(map);
ie = new IdentifiedElement({
id : 329170,
modelId : map.getId(),
type : "ALIAS"
id: 329170,
modelId: map.getId(),
type: "ALIAS"
});
return map.getModel().getByIdentifiedElement(ie, true);
}).then(function(alias) {
}).then(function (alias) {
aliasWindow = new AliasInfoWindow({
alias : alias,
map : map
alias: alias,
map: map
});
return oc.getDetailDataByIdentifiedElement(ie, true);
}).then(function(data) {
}).then(function (data) {
var overlayDiv = aliasWindow.createOverlayInfoDiv(oc, data);
assert.ok(functions.isDomElement(overlayDiv));
});
});
it("createCommentOverlayInfoDiv", function() {
it("createCommentOverlayInfoDiv", function () {
var map = helper.createCustomMap();
var oc = helper.createCommentDbOverlay(map);
......@@ -163,11 +165,11 @@ describe('AliasInfoWindow', function() {
map.getModel().addAlias(alias);
var aliasWindow = new AliasInfoWindow({
alias : alias,
map : map
alias: alias,
map: map
});
return oc.getDetailDataByIdentifiedElement(new IdentifiedElement(alias), true).then(function(data) {
return oc.getDetailDataByIdentifiedElement(new IdentifiedElement(alias), true).then(function (data) {
var comment = helper.createComment(alias);
comment.setContent("test comment Content");
......@@ -183,32 +185,32 @@ describe('AliasInfoWindow', function() {
});
it("createGeneticsDiv", function() {
it("createGeneticsDiv", function () {
var map;
var overlay;
var layoutAlias;
var win;
return ServerConnector.getProject().then(function(project) {
return ServerConnector.getProject().then(function (project) {
map = helper.createCustomMap(project);
overlay = new LayoutData(18077, "xxx");
return overlay.init();
}).then(function() {
}).then(function () {
return overlay.getFullAliasById(overlay.getAliases()[0].getId());
}).then(function(data) {
}).then(function (data) {
layoutAlias = data;
return map.getModel().getAliasById(layoutAlias.getId());
}).then(function(alias) {
}).then(function (alias) {
win = new AliasInfoWindow({
alias : alias,
map : map
alias: alias,
map: map
});
return win.init();
}).then(function() {
win.layoutAliases = [ layoutAlias ];
}).then(function () {
win.layoutAliases = [layoutAlias];
return win.createGenomicDiv();
}).then(function(div) {
}).then(function (div) {
assert.ok(div);
assert.ok(div.innerHTML.indexOf("No reference genome data available on minerva platform") === -1);
win.destroy();
......@@ -216,28 +218,28 @@ describe('AliasInfoWindow', function() {
});
it("createGeneticsDiv with no genetic data", function() {
it("createGeneticsDiv with no genetic data", function () {
var map;
var win;
var aliasId = 329173;
return ServerConnector.getProject().then(function(project) {
return ServerConnector.getProject().then(function (project) {
map = helper.createCustomMap(project);
var overlay = new LayoutData(18077, "xxx");
return overlay.init();
}).then(function() {
}).then(function () {
return map.getModel().getAliasById(aliasId);
}).then(function(alias) {
}).then(function (alias) {
win = new AliasInfoWindow({
alias : alias,
map : map
alias: alias,
map: map
});
return win.init();
}).then(function() {
win.layoutAliases = [ undefined ];
}).then(function () {
win.layoutAliases = [undefined];
return win.createGenomicDiv();
}).then(function(div) {
}).then(function (div) {
assert.ok(div);
assert.ok(div.innerHTML.indexOf("No reference genome data available on minerva platform") === -1);
win.destroy();
......@@ -245,36 +247,36 @@ describe('AliasInfoWindow', function() {
});
it("createGeneticsDivForUnknownOrganism", function() {
it("createGeneticsDivForUnknownOrganism", function () {
var map;
var overlay;
var layoutAlias;
var win;
return ServerConnector.getProject().then(function(project) {
return ServerConnector.getProject().then(function (project) {
project.setOrganism({
type : "TAXONOMY",
resource : "123456"
type: "TAXONOMY",
resource: "123456"
});
map = helper.createCustomMap(project);
overlay = new LayoutData(18077, "xxx");
return overlay.init();
}).then(function() {
}).then(function () {
return overlay.getFullAliasById(overlay.getAliases()[0].getId());
}).then(function(data) {
}).then(function (data) {
layoutAlias = data;
return map.getModel().getAliasById(layoutAlias.getId());
}).then(function(alias) {
}).then(function (alias) {
win = new AliasInfoWindow({
alias : alias,
map : map
alias: alias,
map: map
});
return win.init();
}).then(function() {
win.layoutAliases = [ layoutAlias ];
}).then(function () {
win.layoutAliases = [layoutAlias];
return win.createGenomicDiv();
}).then(function(div) {
}).then(function (div) {
assert.ok(div);
assert.ok(div.innerHTML.indexOf("No reference genome data available on minerva platform") >= -1);
win.destroy();
......@@ -282,16 +284,41 @@ describe('AliasInfoWindow', function() {
});
it("createWaitingContentDiv", function() {
it("createWaitingContentDiv", function () {
var map = helper.createCustomMap();
var alias = helper.createAlias(map);
alias.setIsComplete(true);
var aliasWindow = new AliasInfoWindow({
alias : alias,
map : map
alias: alias,
map: map
});
assert.ok(functions.isDomElement(aliasWindow.createWaitingContentDiv()));
});
it("createChartDiv ", function () {
var map, ie, aliasWindow;
return ServerConnector.getProject().then(function (project) {
map = helper.createCustomMap(project);
ie = new IdentifiedElement({
id: 329170,
modelId: map.getId(),
type: "ALIAS"
});
return map.getModel().getByIdentifiedElement(ie, true);
}).then(function (alias) {
aliasWindow = new AliasInfoWindow({
alias: alias,
map: map
});
aliasWindow.layoutAliases = [helper.createLayoutAlias(alias), null];
aliasWindow.layoutNames = ["x", "y"];
return aliasWindow.createChartDiv();
}).then(function (div) {
assert.ok(div);
});
});
});
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