ModificationSite and Residue classes extracted (14a66f69) · Commits · minerva / core

Commit 14a66f69 authored 6 years ago by Piotr Gawron

Browse files

ModificationSite and Residue classes extracted

parent 29a98a2a

No related branches found

No related tags found

1 merge request!345Resolve "Genes annotations don't show"

Hide whitespace changes

Inline Side-by-side

Showing

converter-CellDesigner/src/main/java/lcsb/mapviewer/converter/model/celldesigner/species/GeneXmlParser.java 14 additions, 2 deletions

...r/converter/model/celldesigner/species/GeneXmlParser.java
converter-CellDesigner/src/main/java/lcsb/mapviewer/converter/model/celldesigner/species/ProteinXmlParser.java 1 addition, 0 deletions

...onverter/model/celldesigner/species/ProteinXmlParser.java
converter-CellDesigner/src/main/java/lcsb/mapviewer/converter/model/celldesigner/species/SpeciesSbmlParser.java 24 additions, 4 deletions

...nverter/model/celldesigner/species/SpeciesSbmlParser.java
converter-CellDesigner/src/main/java/lcsb/mapviewer/converter/model/celldesigner/structure/CellDesignerGene.java 12 additions, 13 deletions

...verter/model/celldesigner/structure/CellDesignerGene.java
converter-CellDesigner/src/main/java/lcsb/mapviewer/converter/model/celldesigner/structure/CellDesignerProtein.java 1 addition, 1 deletion

...ter/model/celldesigner/structure/CellDesignerProtein.java
converter-CellDesigner/src/main/java/lcsb/mapviewer/converter/model/celldesigner/structure/fields/CellDesignerGeneRegion.java 372 additions, 0 deletions

...celldesigner/structure/fields/CellDesignerGeneRegion.java
converter-CellDesigner/src/main/java/lcsb/mapviewer/converter/model/celldesigner/structure/fields/CellDesignerModificationResidue.java 32 additions, 3 deletions

...ner/structure/fields/CellDesignerModificationResidue.java
converter-CellDesigner/src/main/java/lcsb/mapviewer/converter/model/celldesigner/structure/fields/SpeciesState.java 1 addition, 1 deletion

...ter/model/celldesigner/structure/fields/SpeciesState.java
converter-CellDesigner/src/test/java/lcsb/mapviewer/converter/model/celldesigner/CellDesignerXmlParserTest.java 3 additions, 2 deletions

...nverter/model/celldesigner/CellDesignerXmlParserTest.java
converter-CellDesigner/src/test/java/lcsb/mapviewer/converter/model/celldesigner/species/GeneXmlParserTest.java 2 additions, 1 deletion

...nverter/model/celldesigner/species/GeneXmlParserTest.java
converter-CellDesigner/src/test/java/lcsb/mapviewer/converter/model/celldesigner/structure/GeneTest.java 129 additions, 128 deletions

...ewer/converter/model/celldesigner/structure/GeneTest.java
converter-CellDesigner/src/test/java/lcsb/mapviewer/converter/model/celldesigner/structure/SpeciesStateTest.java 2 additions, 2 deletions

...verter/model/celldesigner/structure/SpeciesStateTest.java
converter-SBGNML/src/main/java/lcsb/mapviewer/converter/model/sbgnml/SbgnmlXmlParser.java 2 additions, 1 deletion

...csb/mapviewer/converter/model/sbgnml/SbgnmlXmlParser.java
converter-SBGNML/src/test/java/lcsb/mapviewer/converter/model/sbgnml/SbgnmlXmlParserTest2.java 2 additions, 2 deletions

...apviewer/converter/model/sbgnml/SbgnmlXmlParserTest2.java
model/src/main/java/lcsb/mapviewer/model/map/species/Gene.java 113 additions, 113 deletions

.../src/main/java/lcsb/mapviewer/model/map/species/Gene.java
model/src/main/java/lcsb/mapviewer/model/map/species/Protein.java 1 addition, 1 deletion

...c/main/java/lcsb/mapviewer/model/map/species/Protein.java
model/src/main/java/lcsb/mapviewer/model/map/species/field/ElementModification.java 2 additions, 0 deletions

...apviewer/model/map/species/field/ElementModification.java
model/src/main/java/lcsb/mapviewer/model/map/species/field/ModificationResidue.java 15 additions, 13 deletions

...apviewer/model/map/species/field/ModificationResidue.java
model/src/main/java/lcsb/mapviewer/model/map/species/field/ModificationSite.java 39 additions, 0 deletions

...b/mapviewer/model/map/species/field/ModificationSite.java
model/src/main/java/lcsb/mapviewer/model/map/species/field/Residue.java 39 additions, 0 deletions

.../java/lcsb/mapviewer/model/map/species/field/Residue.java

with 806 additions and 287 deletions

Please register or to comment