Question about execution Sna
Dear, I performed the installation and test/test_config.yaml was executed correctly, but after configuring the config.yaml with my data and execute ~/PathoFact$ snakemake -s Snakefile --use-conda --reason --cores 64 -p I got the following error message:
Building DAG of jobs... MissingInputException in line 33 of /home/superserver/PathoFact/Snakefile: Missing input files for rule check_AMR_MGE: /home/superserver/PathoFact/output_expected/PathoFact_report/AMR_MGE_prediction_CP011849_report.tsv
regards