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  • #66
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Issue created Apr 06, 2021 by Vadim (Dani) Dubinsky@VadimDu

Error in Combine_Toxin_SignalP.smk file

Dear developer,

When I try to run the tool with the standard command (snakemake -s PathoFact/Snakefile --use-conda --reason --cores 4 –p) I got the following error:

MissingInputException in line 11 of /home/danid/PathoFact/rules/Toxin/Combine_Toxin_SignalP.smk:

Missing input files for rule R_script:

databases/library_HMM_Toxins.csv

I installed PathoFact with Conda, set up the config.yml file, and all the libraries seem to be in place, including the library_HMM_Toxins.csv appearing in the error.

I will appreciate your help, Best Vadim

Edited Apr 06, 2021 by Vadim (Dani) Dubinsky
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