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Created by Valentina Galata@valentina.galataDeveloper5 of 5 tasks completed5/5 tasks

spring-clean: DeepARG

Dependency: DeepARG

  • git submodule
  • rm dir. in scripts/
  • rm git clone from set-up.sh
  • update path in config.yaml
  • set-up commands: replace path and make DIAMOND bin executable
git lfs install # if not already done
git submodule add https://gaarangoa@bitbucket.org/gusphdproj/deeparg-ss.git submodules/deeparg-ss
cd submodules/deeparg-ss/
git checkout 14b8dce

Impact: Could affect the results if there are any discrepancies between the versions of any dependency. Therefore:

  • Confirm git version
  • Use same YAML as in original repo
Edited by Valentina Galata