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Issue created Apr 16, 2020 by Valentina Galata@valentina.galataDeveloper

Snakemake: use && or || to concat CMDs in rules

If a rule has multiple CMDs use && or || to concatenate them (if appropriate)

# execute cmd1
# if cmd1 fails execute cmd2 otherwise cmd2 is not executed
cmd1 || cmd2

# execute cmd1
# if cmd1 succeeds execute cmd2 otherwise cmd2 is not executed
cmd1 && cmd2
Edited Jun 08, 2020 by Valentina Galata
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