* R/mix.R(presc.shiny): The prescreening analysis box is ready to be used.

* R/mix.R(presc.shiny): Checkboxes are present for every tag using
  lapply() and do.call().

* R/mix.R(presc.shiny): A new textInput to be able to change the name
  from the default one.

* R/mix.R(presc.shiny): Added observeEvent, new server bits to plot
  pdf.

* R/mix.R: Modified server to test for button clicks.

Master

See merge request !1

* R/mix.R(presc.shiny): Updated.

Layout plot

See merge request rmb-mix-method!14

Dev

See merge request rmb-mix-method!12

* DESCRIPTION: New imports.
  [curl]

* R/mix.R(rendersmiles2,renderurl): New functions.
  Various function that are a rip-off of Emma's RChemMass and deal
  with the plotting of structures using an online resource.

* man: Update docs.

Numerous prettifying changes

See merge request rmb-mix-method!11

More sensible (re)loading of the configuration files, encapsulation of
certain operations and other fixes

* mix.R(get_.*): Generate various filenames.

* mix.R(various intermediate wrappers around RMassBank calls):
  removed.

* run.R(presc.do): Adjust to changes in mix.R

* man: Update docs.

* NAMESPACE: Update exports.

Rmbmix stable

See merge request rmb-mix-method!8

* README.org: New file.

The main issue is that I have removed type='FORK' everywhere it
clearly produced issues. I should probably do that in presc, too.

Merge prescreening capability

See merge request rmb-mix-method!7

* README.org: New file.

# Conflicts:
#   DESCRIPTION
#   R/mix.R

Finally plotting works nicely.

* R/mix.R(presc.plot): New argument.
  [pal] Colorbrewer palette.

* R/mix.R(presc.plot): New function. Plots the prescreening data.

R/mix.R(RMB_EIC_prescreen_df): Fix. Data frame now collects all
children.

* R/run.R(presc.do): New function. Top level prescreening function.

* NAMESPACE: New exports.

* man: Update doc.

* R/mix.R(presc.p): New function. Paralellises presc.single.

* NAMESPACE: New export.

* man: Update docs.

* R/mix.R(presc.v): New function. Vectorises presc.single.

* NAMESPACE: Update exports.

* man(presc.single.Rd,presc.v.Rd): Update docs.