#Load the analysis.csv that contains the path where the mzML files are. There is one different anaylsis.csv per LC mode (RP or HILIC) and per ionization mode (positive or negative), althought this code is just for the negative mode.
#Positive ionization files
anaInfoNeg<-read.csv("analysis_RP_NEG.csv")#note that for analyzing HILIC the analysis.csv need to be changed here
#Load the analysis.csv that contains the path where the mzML files are. There is one different anaylsis.csv per LC mode (RP or HILIC) and per ionization mode (positive or negative), althought this code is just for the positive mode.