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Commit 35619c1d authored by arq5x's avatar arq5x
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[TST] add tests for map

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......@@ -617,4 +617,47 @@ chr10 20 30 ." > exp
$BT map -g genome -a a.vsorted.bed -b b.vsorted.bed -c 1 -o collapse > obs
check obs exp
###########################################################
# Test invalid column
############################################################
echo " map.t41..\c"
echo \
"
*****
*****ERROR: requested column 41 , but record only has fields 1 - 6. Exiting.
*****" > exp
$BT map -a ivls.bed -b values5.bed -c 41 -o collapse 2> obs
check obs exp
rm obs exp
###########################################################
# Test invalid column
############################################################
echo " map.t42..\c"
echo \
"
*****
*****ERROR: requested column -1 , but record only has fields 1 - 6. Exiting.
*****" > exp
$BT map -a ivls.bed -b values5.bed -c -1 -o collapse 2> obs
check obs exp
rm obs exp
###########################################################
# Test invalid column
############################################################
echo " map.t43..\c"
echo \
"
*****
*****ERROR: requested column 0 , but record only has fields 1 - 6. Exiting.
*****" > exp
$BT map -a ivls.bed -b values5.bed -c 0 -o collapse 2> obs
check obs exp
rm obs exp
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