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Commit 2e766670 authored by Brent Pedersen's avatar Brent Pedersen
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add tests for groupby

parent 64acb9d1
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lines_a=$(../../bin/groupBy -g 3-1 -o collapse -c 4 -i ../map/values3.bed | wc -l)
lines_b=$(../../bin/groupBy -g 1-3 -o collapse -c 4 -i ../map/values3.bed | wc -l)
lines_c=$(../../bin/groupBy -g 1,2,3 -o collapse -c 4 -i ../map/values3.bed | wc -l)
lines_d=$(../../bin/groupBy -g 1-2,3 -o collapse -c 4 -i ../map/values3.bed | wc -l)
check(){
if [ "$1" != "$2" ]; then
"fail groupby"
fi
}
check $lines_a $lines_b
check $lines_a $lines_c
check $lines_a $lines_d
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