From 2e7666702214e47ab20c34fec41ee49f42cec040 Mon Sep 17 00:00:00 2001
From: Brent Pedersen <bpederse@gmail.com>
Date: Fri, 24 Aug 2012 10:06:43 -0600
Subject: [PATCH] add tests for groupby
---
test/groupBy/test-groupby.sh | 14 ++++++++++++++
1 file changed, 14 insertions(+)
create mode 100644 test/groupBy/test-groupby.sh
diff --git a/test/groupBy/test-groupby.sh b/test/groupBy/test-groupby.sh
new file mode 100644
index 00000000..4a9c4c7c
--- /dev/null
+++ b/test/groupBy/test-groupby.sh
@@ -0,0 +1,14 @@
+lines_a=$(../../bin/groupBy -g 3-1 -o collapse -c 4 -i ../map/values3.bed | wc -l)
+lines_b=$(../../bin/groupBy -g 1-3 -o collapse -c 4 -i ../map/values3.bed | wc -l)
+lines_c=$(../../bin/groupBy -g 1,2,3 -o collapse -c 4 -i ../map/values3.bed | wc -l)
+lines_d=$(../../bin/groupBy -g 1-2,3 -o collapse -c 4 -i ../map/values3.bed | wc -l)
+
+check(){
+ if [ "$1" != "$2" ]; then
+ "fail groupby"
+ fi
+}
+
+check $lines_a $lines_b
+check $lines_a $lines_c
+check $lines_a $lines_d
--
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