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Commit 376b7203 authored by Laurent Heirendt's avatar Laurent Heirendt :airplane:
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Merge branch 'rename' into 'develop' 

change all references to labcards

See merge request R3/howto-cards!16
parents bf4af641 52d0403f
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2 merge requests!19Regular merge of develop,!16change all references to labcards
Pipeline #14560 passed
Stage: deploy
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    .ci/.autoRedirect
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    ...@@ -13,20 +13,20 @@ ...@@ -13,20 +13,20 @@
    } }
    }); });
    } }
    UrlExists('https://r3-core.pages.uni.lu/labCards-internal/index.html', function(status){ UrlExists('https://r3-core.pages.uni.lu/howto-cards-internal/index.html', function(status){
    if(status === 200){ if(status === 200){
    // internal pages // internal pages
    window.location.href = 'https://r3-core.pages.uni.lu/labCards-internal/stable'; window.location.href = 'https://r3-core.pages.uni.lu/howto-cards-internal/stable';
    } else { } else {
    // external pages // external pages
    window.location.href = 'https://r3.pages.uni.lu/labCards/stable'; window.location.href = 'https://r3.pages.uni.lu/howto-cards/stable';
    } }
    }); });
    </script> </script>
    </head> </head>
    <body> <body>
    <p> <p>
    Please follow to <a href="https://r3.pages.uni.lu/labCards/stable">https://r3.pages.uni.lu/labCards/stable</a>! Please follow to <a href="https://r3.pages.uni.lu/howto-cards/stable">https://r3.pages.uni.lu/howto-cards/stable</a>!
    </p> </p>
    </body> </body>
    </html> </html>
    .ci/deploy.sh
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    ...@@ -16,7 +16,7 @@ for branch in $(git for-each-ref --format='%(refname:strip=3)' refs/remotes); do ...@@ -16,7 +16,7 @@ for branch in $(git for-each-ref --format='%(refname:strip=3)' refs/remotes); do
    git reset --hard $branch git reset --hard $branch
    # build the website # build the website
    bundle exec jekyll build --baseurl="labCards/$artefact" -d "public/$artefact" bundle exec jekyll build --baseurl="howto-cards/$artefact" -d "public/$artefact"
    done done
    # checkout the current branch # checkout the current branch
    ......
    .gitignore
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    ...@@ -8,4 +8,26 @@ ...@@ -8,4 +8,26 @@
    _site _site
    .sass-cache .sass-cache
    .jekyll-metadata .jekyll-metadata
    Gemfile.lock Gemfile.lock
    \ No newline at end of file index.html
    package-lock.json
    dist/
    public/
    node_modules/
    dist
    *.log
    .sass-cache
    .grunt
    .DS_Store
    yarn.lock
    stable/
    latest/
    Gruntfile.coffee
    !template/Gruntfile.coffee
    package.json
    !template/package.json
    20*/*/theme
    !./theme
    ./theme/package.json
    __pycache__/
    contribute.egg-info/
    _config.yml
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    ...@@ -12,18 +12,18 @@ ...@@ -12,18 +12,18 @@
    # you will see them accessed via {{ site.title }}, {{ site.email }}, and so on. # you will see them accessed via {{ site.title }}, {{ site.email }}, and so on.
    # You can create any custom variable you would like, and they will be accessible # You can create any custom variable you would like, and they will be accessible
    # in the templates via {{ site.myvariable }}. # in the templates via {{ site.myvariable }}.
    title: R3 LabCards for Data Management and IT. title: R3 howto-cards for Data Management and IT.
    email: lcsb-sysadmins@uni.lu email: lcsb-sysadmins@uni.lu
    description: >- # this means to ignore newlines until "baseurl:" description: >- # this means to ignore newlines until "baseurl:"
    Bioinformatics Core assists LCSB researchers with the organization, management, and curation of research data through its R3 initiative. Bioinformatics Core assists LCSB researchers with the organization, management, and curation of research data through its R3 initiative.
    This page is an index for lab cards that are intended to provide practical guidance in implementing Data Management, Data Protection and IT setup. This page is an index for lab cards that are intended to provide practical guidance in implementing Data Management, Data Protection and IT setup.
    # URL settings (the most difficult part, please refer to the guide) # URL settings (the most difficult part, please refer to the guide)
    baseurl: "/labCards" # the subpath of your site, e.g. /gitlab-repository-name baseurl: "/howto-cards" # the subpath of your site, e.g. /gitlab-repository-name
    url: "https://r3.pages.uni.lu" # the base hostname & protocol for your site, e.g. http://gitlab-namespace-name.pages.uni.lu/ url: "https://r3.pages.uni.lu" # the base hostname & protocol for your site, e.g. http://gitlab-namespace-name.pages.uni.lu/
    # Banner settings # Banner settings
    banner: labcard # When you have custom images, change this setting's value to the name of the folder containing them banner: howto-card # When you have custom images, change this setting's value to the name of the folder containing them
    logo: small # Change to "big" (without quotas) in case of having broad logo logo: small # Change to "big" (without quotas) in case of having broad logo
    date: "2019" date: "2019"
    ......
    external/daisy/R3labCARD-daisy.md → external/daisy/daisy.md
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    ...@@ -5,7 +5,7 @@ permalink: /external/daisy/ ...@@ -5,7 +5,7 @@ permalink: /external/daisy/
    --- ---
    # <a name="top"></a>DAISY User Guide # <a name="top"></a>DAISY User Guide
    {:.no_toc} {:.no_toc}
    This LabCard is the user guide for the Data Information System (DAISY). If it is your first time with the guide then start with Section **DAISY at a Glance**. This howto-card is the user guide for the Data Information System (DAISY). If it is your first time with the guide then start with Section **DAISY at a Glance**.
    * TOC * TOC
    {:toc} {:toc}
    ......
    external/exchange-channels/R3labCARD-exchange-channels.md → external/exchange-channels/exchange-channels.md
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    ...@@ -5,7 +5,7 @@ permalink: /external/exchange-channels/ ...@@ -5,7 +5,7 @@ permalink: /external/exchange-channels/
    # Exchanging Research Data with Collaborators # Exchanging Research Data with Collaborators
    {:.no_toc} {:.no_toc}
    LCSB provides two channels for the exchange of data with research collaborators **ownCloud** and **Data Upload Manager (DUMA)**. This labcard provides information on the use of these exchange channels. LCSB provides two channels for the exchange of data with research collaborators **ownCloud** and **Data Upload Manager (DUMA)**. This howto-card provides information on the use of these exchange channels.
    * TOC * TOC
    {:toc} {:toc}
    ......
    index.md
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    ...@@ -8,7 +8,7 @@ order: 1 ...@@ -8,7 +8,7 @@ order: 1
    Bioinformatics Core assists Luxembourg Centre for Systems Biomedicine ([LCSB](https://www.uni.lu/lcsb)) researchers with the organization, management, and curation of research data through its R3 initiative. This page is an index for lab cards that are intended to provide practical guidance in implementing Data Management, Data Protection and IT setup. Bioinformatics Core assists Luxembourg Centre for Systems Biomedicine ([LCSB](https://www.uni.lu/lcsb)) researchers with the organization, management, and curation of research data through its R3 initiative. This page is an index for lab cards that are intended to provide practical guidance in implementing Data Management, Data Protection and IT setup.
    ## Current LabCards ## Current howto-cards
    * [Exchange data with collaborators](./external/exchange-channels/) * [Exchange data with collaborators](./external/exchange-channels/)
    * [Registering human-subject data to DAISY](./external/daisy/) * [Registering human-subject data to DAISY](./external/daisy/)
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