diff --git a/.ci/.autoRedirect b/.ci/.autoRedirect
index 014b4074656458475341c36bd66346ac59fa34ed..ea858a1432a4d0d3b78b42bf4c586e2a933ad672 100644
--- a/.ci/.autoRedirect
+++ b/.ci/.autoRedirect
@@ -13,20 +13,20 @@
}
});
}
- UrlExists('https://r3-core.pages.uni.lu/labCards-internal/index.html', function(status){
+ UrlExists('https://r3-core.pages.uni.lu/howto-cards-internal/index.html', function(status){
if(status === 200){
// internal pages
- window.location.href = 'https://r3-core.pages.uni.lu/labCards-internal/stable';
+ window.location.href = 'https://r3-core.pages.uni.lu/howto-cards-internal/stable';
} else {
// external pages
- window.location.href = 'https://r3.pages.uni.lu/labCards/stable';
+ window.location.href = 'https://r3.pages.uni.lu/howto-cards/stable';
}
});
</script>
</head>
<body>
<p>
- Please follow to <a href="https://r3.pages.uni.lu/labCards/stable">https://r3.pages.uni.lu/labCards/stable</a>!
+ Please follow to <a href="https://r3.pages.uni.lu/howto-cards/stable">https://r3.pages.uni.lu/howto-cards/stable</a>!
</p>
</body>
</html>
diff --git a/.ci/deploy.sh b/.ci/deploy.sh
index 725c1f6b9d49679dce0977c968ea7a65a4826400..2bbc4190cefb660ba07401e3f7f9f4ab7162d4ed 100644
--- a/.ci/deploy.sh
+++ b/.ci/deploy.sh
@@ -16,7 +16,7 @@ for branch in $(git for-each-ref --format='%(refname:strip=3)' refs/remotes); do
git reset --hard $branch
# build the website
- bundle exec jekyll build --baseurl="labCards/$artefact" -d "public/$artefact"
+ bundle exec jekyll build --baseurl="howto-cards/$artefact" -d "public/$artefact"
done
# checkout the current branch
diff --git a/.gitignore b/.gitignore
index 0138ce5def5970662bcd90af3fc415edf7d84570..2a36ff344a896ce837665d3a80cef16371701c9e 100644
--- a/.gitignore
+++ b/.gitignore
@@ -8,4 +8,26 @@
_site
.sass-cache
.jekyll-metadata
-Gemfile.lock
\ No newline at end of file
+Gemfile.lock
+index.html
+package-lock.json
+dist/
+public/
+node_modules/
+dist
+*.log
+.sass-cache
+.grunt
+.DS_Store
+yarn.lock
+stable/
+latest/
+Gruntfile.coffee
+!template/Gruntfile.coffee
+package.json
+!template/package.json
+20*/*/theme
+!./theme
+./theme/package.json
+__pycache__/
+contribute.egg-info/
diff --git a/_config.yml b/_config.yml
index 0b7b6bf5aa90cd8cfe9d4cd345ac83159fb94efd..8a1dfd6708898d4ea8e2aa38f465e26e9320ffd1 100644
--- a/_config.yml
+++ b/_config.yml
@@ -12,18 +12,18 @@
# you will see them accessed via {{ site.title }}, {{ site.email }}, and so on.
# You can create any custom variable you would like, and they will be accessible
# in the templates via {{ site.myvariable }}.
-title: R3 LabCards for Data Management and IT.
+title: R3 howto-cards for Data Management and IT.
email: lcsb-sysadmins@uni.lu
description: >- # this means to ignore newlines until "baseurl:"
Bioinformatics Core assists LCSB researchers with the organization, management, and curation of research data through its R3 initiative.
This page is an index for lab cards that are intended to provide practical guidance in implementing Data Management, Data Protection and IT setup.
# URL settings (the most difficult part, please refer to the guide)
-baseurl: "/labCards" # the subpath of your site, e.g. /gitlab-repository-name
+baseurl: "/howto-cards" # the subpath of your site, e.g. /gitlab-repository-name
url: "https://r3.pages.uni.lu" # the base hostname & protocol for your site, e.g. http://gitlab-namespace-name.pages.uni.lu/
# Banner settings
-banner: labcard # When you have custom images, change this setting's value to the name of the folder containing them
+banner: howto-card # When you have custom images, change this setting's value to the name of the folder containing them
logo: small # Change to "big" (without quotas) in case of having broad logo
date: "2019"
diff --git a/assets/banners/labcard/banner.svg b/assets/banners/howto-card/banner.svg
similarity index 100%
rename from assets/banners/labcard/banner.svg
rename to assets/banners/howto-card/banner.svg
diff --git a/assets/banners/labcard/logos.svg b/assets/banners/howto-card/logos.svg
similarity index 100%
rename from assets/banners/labcard/logos.svg
rename to assets/banners/howto-card/logos.svg
diff --git a/assets/banners/labcard/motto.svg b/assets/banners/howto-card/motto.svg
similarity index 100%
rename from assets/banners/labcard/motto.svg
rename to assets/banners/howto-card/motto.svg
diff --git a/external/daisy/R3labCARD-daisy.md b/external/daisy/daisy.md
similarity index 83%
rename from external/daisy/R3labCARD-daisy.md
rename to external/daisy/daisy.md
index 948fd7118b738dba52e40432f6132f775b7e0095..d6be7f59138a49194fb1b2df59d824563d9a8147 100644
--- a/external/daisy/R3labCARD-daisy.md
+++ b/external/daisy/daisy.md
@@ -5,7 +5,7 @@ permalink: /external/daisy/
---
# <a name="top"></a>DAISY User Guide
{:.no_toc}
-This LabCard is the user guide for the Data Information System (DAISY). If it is your first time with the guide then start with Section **DAISY at a Glance**.
+This howto-card is the user guide for the Data Information System (DAISY). If it is your first time with the guide then start with Section **DAISY at a Glance**.
* TOC
{:toc}
diff --git a/external/exchange-channels/R3labCARD-exchange-channels.md b/external/exchange-channels/exchange-channels.md
similarity index 81%
rename from external/exchange-channels/R3labCARD-exchange-channels.md
rename to external/exchange-channels/exchange-channels.md
index 8fa478f1b688dd4b3558689f6bc71dc72736e8cd..e621f2b6a5d4b6109b77785478b65ae3b3c9653a 100644
--- a/external/exchange-channels/R3labCARD-exchange-channels.md
+++ b/external/exchange-channels/exchange-channels.md
@@ -5,7 +5,7 @@ permalink: /external/exchange-channels/
# Exchanging Research Data with Collaborators
{:.no_toc}
-LCSB provides two channels for the exchange of data with research collaborators **ownCloud** and **Data Upload Manager (DUMA)**. This labcard provides information on the use of these exchange channels.
+LCSB provides two channels for the exchange of data with research collaborators **ownCloud** and **Data Upload Manager (DUMA)**. This howto-card provides information on the use of these exchange channels.
* TOC
{:toc}
diff --git a/index.md b/index.md
index 30ac0498ef33f1f3cc3f2e1bdc534b0635429c5d..4714610d03558140077f986169211a8ecd9958d2 100644
--- a/index.md
+++ b/index.md
@@ -8,7 +8,7 @@ order: 1
Bioinformatics Core assists Luxembourg Centre for Systems Biomedicine ([LCSB](https://www.uni.lu/lcsb)) researchers with the organization, management, and curation of research data through its R3 initiative. This page is an index for lab cards that are intended to provide practical guidance in implementing Data Management, Data Protection and IT setup.
-## Current LabCards
+## Current howto-cards
* [Exchange data with collaborators](./external/exchange-channels/)
* [Registering human-subject data to DAISY](./external/daisy/)