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Commit 1559cb02 authored by Marek Ostaszewski's avatar Marek Ostaszewski
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adapted instructions

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1 merge request!3adapted instructions
......@@ -91,6 +91,9 @@ Take a look at the [vocabulary disclaimer](#read-first-vocabulary-and-data-model
2.1.3 Set up the initial compartment for the facts, use ![menuadd](../images/0_add.png) button to add a compartment and ![menuedit](../images/0_edit.png) to edit it. In the example below, the compartment is set to "cell" with the [qualifier annotation](http://mbine.org/standards/qualifiers) set to "bqbiol:is", annotation ontology set to "Cell Ontology" and the assigned identifier to [CL:0000000 (cell)](http://purl.obolibrary.org/obo/CL_0000000) (3 in the figure below).
2.1.4 Set the default qualifier to "bqbiol:is" and the annotation ontology set to "Uniprot Knowledgebase".
These will be used as defaults when adding elements.
<img src="../images/tmc_2_1_basket_details_inset.png" width="600">
### 2.2. Add elements
......@@ -104,7 +107,7 @@ Take a look at the [vocabulary disclaimer](#read-first-vocabulary-and-data-model
Example:
- use previolusly defined "cell" as the "Compartment"
- set "Bioentity type" to "Generic protein"
- set identifier namespace to "Uniprot Knowledgebase".
- identifier qualifier and namespace are set from defaults.
Repeat for p65 and set its name to "RELA" by modifying the field "Species Name".
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