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Miroslav Kratochvil
shinyscreen
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f99bf3ec883079ec5f5bd8b6540d8c17b3ed1068
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3
devel
joss
master
default
protected
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20
v1.3.21
v1.3.19
v1.3.18
v1.3.16
v1.3.15
v1.3.14
v1.3.13
v1.3.12
v1.3.10
v1.3.9
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v1.3.7
v1.3.6
v1.3.5
v1.3.3-9001
v1.3.3
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v1.3.1-1
v1.3.1
v1.3.0
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Created with Raphaël 2.2.0
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Update documentation.
v1.3.21 master
v1.3.21 master
Update documentation.
Article draft: Initial commit
joss
joss
Clean up before adding the paper draft
Update version.
Adapt tests to changes so far.
Close many stale FIXMEs.
Fix comment.
Update test-integration.
Remove comment.
Adapted `mf_narrow_summ' and `pack_ms2_w_summ' to new data model.
shiny-state: -> -> = .
The output `print_spec_tab' now adapted to new data model.
Clean up some comments in `make_spec_ms2_plot'.
test-integration: Saves obtained test state for further diagnosis.
Fix wrong assigment of MS2 from precids non-existant for a given file in `relate_ms2_to_precid'.
Adapt make_*plot calls in shiny-ui-base.
Drop `extr_ms1' argument of `make_eic_ms1_plot'.
Adapt `make_spec_ms2_plot' to work with new data-model.
Cleaned up get_data_4_eic_ms2
Cleaned up make_eic_ms1_plot and related functions.
Function `gen_val_unc' now represents errors with uncertanties.
Prevent generating tables with multiple identical cols by `get_data_from_key'.
Test for `narrow_summ' and start testing `make_eic_ms1_plot'.
Starting from a trimmed down state in test-plotting to enable prescreening.
System to synthetise bogus MS spectra completed.
Update keys in empty_cgram_ms1 and empty_cgram_ms2.
Functions empty_cgram_ms1 and empty_cgram_ms2 construct empty chromatograms.
<- -> =
Adapted get_data_from_key and its calees.
data-model: Fix precid/isocoarse merge for isobars.
get_data_4_eic_ms1: Add 'db' argument.
Function make_eic_ms1_plot got a new argument `db'.
tests/testthat/test-plotting: Commented out bits under refactoring.
extr$ms? -> db$extr$cgm$ms?
an -> scan
Refactored `gen_summ' to work off new data model.
Move gen_summ from mix to data-model.
analyse_extracted_data: Adapted to db inputs. Also fixed sec/mins conversions in a couple of places.
extraction: find_ms1_max: Now correctly works with NAs in intensity.
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