merge API call produces incorrect files due to an RDF tag header missing
I wanted to merge the following two files: merged_pathwaysSBML.xml
and merged_pathwaysGPML.xml
(attached).
These come from a merging of a series of Reactome and WikiPathways, respectively.
These are two viable CellDesigner files. However, when zipped (attached) and merged (curl call below) they produce bad output (attached).
The error stems from RDF headers missing in notes of CellDesigner included species of RASGRP4
, but I don't see any regularity of how does this happen.
These do not overlap between two files, there is no identifier clash, there are other included gene species in the source files.
curl call used:
curl 'https://minerva-service.lcsb.uni.lu/minerva/api/convert/merge/CellDesigner_SBML:CellDesigner_SBML' -X POST --data-binary @maps_1.zip -H 'Content-Type: application/octet-stream' > bad_output.xml