updated funcs

src/base/utils/Gene.jl

@@ -13,12 +13,7 @@ function check_duplicate_annotations(
     for (k, gene) in gs
         if k != check_gene.id
             for anno in inspect_annotations
-                if !isempty(
-                    intersect(
-                        get(gene.annotations, anno, ["c1"]),
-                        get(check_gene.annotations, anno, "c2"),
-                    ),
-                )
+                if any(in.(get(gene.annotations, anno, ["c1"]), Ref(get(check_gene.annotations, anno, ["c2"]))))
                     return k
                 end
             end

src/base/utils/Metabolite.jl

@@ -13,12 +13,7 @@ function check_duplicate_annotations(
     for (k, met) in mets
         if met.compartment == cmet.compartment && k != cmet.id
             for anno in inspect_annotations
-                if !isempty(
-                    intersect(
-                        get(met.annotations, anno, ["c1"]),
-                        get(cmet.annotations, anno, ["c2"]),
-                    ),
-                )
+                if any(in.(get(met.annotations, anno, ["c1"]), Ref(get(cmet.annotations, anno, ["c2"]))))
                     return k
                 end
             end

src/base/utils/Reaction.jl

@@ -54,10 +54,10 @@ function check_duplicate_annotations(
     for (k, rxn) in rxns
         if k != crxn.id
             for anno in inspect_annotations
-                if !isempty(
-                    intersect(
+                if any(
+                    in.(
                         get(crxn.annotations, anno, ["c1"]),
-                        get(rxn.annotations, anno, ["c2"]),
+                        Ref(get(rxn.annotations, anno, ["c2"])),
                     ),
                 )
                     return k