docs/src/notebooks/5_basic_stdmodel_construction.jl

src/analysis/flux_balance_analysis.jl

src/analysis/modifications/optimizer.jl

src/analysis/parsimonious_flux_balance_analysis.jl

src/analysis/sampling/affine_hit_and_run.jl

src/io/show/Reaction.jl

src/reconstruction/CoreModel.jl

src/reconstruction/CoreModelCoupled.jl

src/reconstruction/Reaction.jl

src/reconstruction/StandardModel.jl

test/reconstruction/CoreModel.jl

test/reconstruction/Reaction.jl

test/reconstruction/add_reactions.jl