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  • IMP
  • Issues

  • Open 72
  • Closed 133
  • All 205
  • Priority Created date Updated date Milestone due date Due date Popularity Label priority Manual Title Weight Blocking
  • Accelerating the rRNA filtering step
    IMP#136 · created Sep 14, 2018 by Cedric Laczny   Enhancement
    • 5
    updated Oct 10, 2018
  • Add new binning tools
    IMP#80 · created Nov 11, 2016 by Shaman Narayanasamy   Enhancement tooling
    • 0
    updated Nov 10, 2017
  • Annotate rule fails
    IMP#124 · created Feb 12, 2018 by Fredrik Boulund
    • 2
    updated Feb 14, 2018
  • Assembly/Analysis: replace perl scripts for contig stats
    imp3#52 · created Oct 05, 2021 by Valentina Galata   discussion enhancement feature
    • 0
    updated Oct 05, 2021
  • Assembly: merging/consensus: replace CAP3
    imp3#11 · created Jul 22, 2020 by Valentina Galata   Assembly   enhancement
    • 16
    updated Mar 17, 2021
  • Assembly: MG/MT assembly with MetaSPAdes
    imp3#36 · created Aug 23, 2021 by Valentina Galata   enhancement feature
    • 0
    updated Aug 23, 2021
  • Assembly stats: metaQUAST
    imp3#50 · created Sep 24, 2021 by Valentina Galata   discussion enhancement feature
    • 2
    updated Sep 27, 2021
  • Automate for samples with multiple runs in sequencing
    IMP#118 · created Oct 03, 2017 by Shaman Narayanasamy   Enhancement Potential request
    • 0
    updated Oct 03, 2017
  • Automatic creation of databases after analyses
    IMP#101 · created May 31, 2017 by Shaman Narayanasamy   Enhancement
    • 0
    updated May 31, 2017
  • Binning: add updated binny
    imp3#57 · created Feb 25, 2022 by Valentina Galata   Analysis & Binning updates   enhancement feature update
    • 2
    updated Jun 03, 2022
  • Bug: config tmp folder is ignored during rRNA filtering
    imp3#24 · created Jun 09, 2021 by Valentina Galata   Overhaul   bug
    • 0
    updated Oct 08, 2021
  • CalledProcessError in line 28 of /home/imp/code/rules/Analysis/visualize_mg.rules
    IMP#127 · created Feb 14, 2018 by Fredrik Boulund
    • 5
    updated Feb 15, 2018
  • CalledProcessError in line 59 of /home/imp/code/rules/Preprocessing/filtering.rules:
    IMP#151 · created Jan 16, 2019 by TANKENGUO
    • 1
    updated Jan 16, 2019
  • "CalledProcessError" while running 'impy init'
    IMP#93 · created May 10, 2017 by tberben
    • 3
    updated Feb 12, 2018
  • can't find trimmomatic
    IMP#153 · created Feb 15, 2019 by Billy Taj
    • 2
    updated Apr 29, 2020
  • Conda envs: smaller YAML files
    imp3#47 · created Sep 13, 2021 by Valentina Galata   Overhaul   discussion enhancement
    • 1
    updated Feb 04, 2022
  • Configuration: configs, profiles and launchers
    imp3#41 · created Aug 27, 2021 by Valentina Galata   Overhaul   discussion enhancement
    • 2
    updated Apr 19, 2022
  • Config: use appropriate in-built data types   0 of 3 tasks completed
    imp3#35 · created Aug 20, 2021 by Valentina Galata   Overhaul   enhancement
    • 3
    updated Sep 24, 2021
  • Digital normalization
    IMP#98 · created May 31, 2017 by Shaman Narayanasamy   Enhancement
    • 0
    updated May 31, 2017
  • Docs: Trimmomatic adapters
    imp3#18 · created Nov 11, 2020 by Valentina Galata   documentation
    • 0
    updated Nov 11, 2020
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