Explore projects

STAR and DESeq2

An automated workflow for constructing maps of molecular mechanisms for given diseases. It streamlines querying gene-disease and variant-disease associations, calculating enrichment of disease maps and pathways, and combining enriched diagrams with text mining data into a single map, meant for the MINERVA Platform.

ggplot+latex docker image

derived from the work done here https://github.com/snakemake-workflows/chipseq

Docker image to serve as the basis for local plugin tests development

A docker image with pre-installed requirements for running Jekyll, created in order to minimize the build time

drake / docker / gitlab-CI

from https://gitlab.com/ecohealthalliance/drake-gitlab-docker-example