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LCSB Tandem Project Proposal 2023
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DVB-Biocore
LCSB Tandem Project Proposal 2023
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ac776d9e
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ac776d9e
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2 years ago
by
Soumyabrata Ghosh
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Example of high-content imaging data output. Columns A to H represent metadata which includes relevant information about each sample.
Columns I to AA represent different features extracted from the imaging experiment.
Experiment_name,Cell_line (IPSCs ID),Model (Mos or vMOs),Condition/Treatment,Mutation,Tine point,Batch,Replicate,Map2Mask,THMask,TotalNucMask,MAP2byNuc,THByNuc,THbyMAP2,FoxA2Area,FOXA2byNuc,THoverlapMAP2,FoxA2MeanInNuclei,MeanOrganoidHoechst,MeanOrganoidMap2,MeanOrganoidFoxA2,MeanOrganoidTH,SkelTH,Nodes,Links,NodesNorm,LinksNorm,THFragmentation
AZ_Diabetes_project,302,MOs,Low glucose,WT,D30,B2,1,12484738,3354460,42302677,0.295128793,0.079296636,0.268684853,4752023,0.11233386,1188011,442.3100472,303.2011504,457.6985973,289.854362,181.8732252,309887,24747,51276,0.079858142,0.165466767,
AZ_Diabetes_project,278,MOs,Low glucose,WT,D30,B2,1,6251289,2339766,10598772,0.589812575,0.220758216,0.374285367,4900825,0.462395549,1116141,828.9848365,166.8200341,519.3631571,284.5876325,161.1922823,158414,10251,20963,0.06471019,0.132330476,
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