2021/2021-03-18_basicGitTraining/slides/img/fork-crossed.png

+../../../../2020/2020-03-30_basicGitTraining/slides/img/fork-crossed.png
\ No newline at end of file

2021/2021-03-18_basicGitTraining/slides/img/fork.jpg

+../../../../2020/2020-03-30_basicGitTraining/slides/img/fork.jpg
\ No newline at end of file

2021/2021-03-18_basicGitTraining/slides/img/git_definition.png

+../../../../2020/2020-03-30_basicGitTraining/slides/img/git_definition.png
\ No newline at end of file

2021/2021-03-18_basicGitTraining/slides/img/github_app.png

+../../../../2020/2020-03-30_basicGitTraining/slides/img/github_app.png
\ No newline at end of file

2021/2021-03-18_basicGitTraining/slides/img/icon-live-demo.png

+../../../../2020/2020-03-30_basicGitTraining/slides/img/icon-live-demo.png
\ No newline at end of file

2021/2021-03-18_basicGitTraining/slides/img/installation.png

+../../../../2020/2020-03-30_basicGitTraining/slides/img/installation.png
\ No newline at end of file

2021/2021-03-18_basicGitTraining/slides/img/linus.jpg

+../../../../2020/2020-03-30_basicGitTraining/slides/img/linus.jpg
\ No newline at end of file

2021/2021-03-18_basicGitTraining/slides/img/logoLCSB.png

+../../../../2020/2020-03-30_basicGitTraining/slides/img/logoLCSB.png
\ No newline at end of file

2021/2021-03-18_basicGitTraining/slides/img/qualitybadge.png

+../../../../2020/2020-03-30_basicGitTraining/slides/img/qualitybadge.png
\ No newline at end of file

2021/2021-03-18_basicGitTraining/slides/img/r3-training-logo.png

+../../../../2020/2020-03-30_basicGitTraining/slides/img/r3-training-logo.png
\ No newline at end of file

2021/2021-03-18_basicGitTraining/slides/img/redcross.png

+../../../../2020/2020-03-30_basicGitTraining/slides/img/redcross.png
\ No newline at end of file

2021/2021-03-18_basicGitTraining/slides/img/reproCrisis.png

+../../../../2020/2020-03-30_basicGitTraining/slides/img/reproCrisis.png
\ No newline at end of file

2021/2021-03-18_basicGitTraining/slides/img/snoopy.png

+../../../../2020/2020-03-30_basicGitTraining/slides/img/snoopy.png
\ No newline at end of file

2021/2021-03-18_basicGitTraining/slides/img/therac.png

+../../../../2020/2020-03-30_basicGitTraining/slides/img/therac.png
\ No newline at end of file

2021/2021-03-18_basicGitTraining/slides/img/wheel.png

+../../../../2020/2020-03-30_basicGitTraining/slides/img/wheel.png
\ No newline at end of file

2021/2021-03-18_basicGitTraining/slides/index.md

+# Elixir-LU training (R3.school)
+
+## March 18th, 2021
+
+<div style="top: 6em; left: 0%; position: absolute;">
+    <img src="theme/img/lcsb_bg.png">
+</div>
+
+<div style="top: 5em; left: 60%; position: absolute;">
+    <img src="slides/img/elixir.png" height="200px">
+    <img src="slides/img/r3-training-logo.png" height="200px">
+    <br><br><br><br>
+    <h1>Basic git training</h1>
+    <br><br><br><br>
+    <h4>
+        Laurent Heirendt, Ph.D.<br>
+        laurent.heirendt@uni.lu<br>
+        <i>ELIXIR/LU, Luxembourg Centre for Systems Biomedicine</i>
+    </h4>
+</div>
+

2021/2021-03-18_basicGitTraining/slides/installation.md

+# The terminal (shell)
+
+**macOS users:**
+
+> Start the Terminal from your `/Applications` directoy.
+
+![bulb](slides/img/bulb.png) Install iTerm2: [https://www.iterm2.com](https://www.iterm2.com)
+
+<br>
+
+**Windows users:**
+
+> Install Git Bash: [https://git-scm.com/download/win](https://git-scm.com/download/win)
+
+<br>
+
+**Linux users:**
+
+> Launch default terminal.<br>
+![bulb](slides/img/bulb.png) Install Terminator: [https://launchpad.net/terminator](https://launchpad.net/terminator)
+
+
+
+# Installation of `git`
+
+<img src="slides/img/github_app.png" class="as-is" height="200" />
+
+**macOS**
+
+> Install *Xcode Command Line Tools*
+
+<br>
+
+**Windows**
+
+> Install Git Bash: <br>`https://git-scm.com/download/win`
+
+<br>
+
+**Linux (Ubuntu)**
+
+```bash
+$ sudo apt-get install git-all
+```
+
+
+
+# How to get started?
+
+**macOS**
+
+> Start the `Terminal` or `iTerm`.
+
+<br>
+
+**Windows**
+
+> Start `GUI Bash`.
+
+<br>
+
+**Linux (Ubuntu)**
+
+> Start the `Terminal` or `Terminator`.

2021/2021-03-18_basicGitTraining/slides/list.json

+[
+    { "filename": "index.md" },
+    { "filename": "overview.md" },
+    { "filename": "what_is_git.md" },
+    { "filename": "github_gitlab.md" },
+    { "filename": "installation.md" },
+    { "filename": "the_terminal.md" },
+    { "filename": "the_editor.md" },
+    { "filename": "configuration.md" },
+    { "filename": "cloneRepo.md" },
+    { "filename": "forks.md" },
+    { "filename": "branches.md" },
+    { "filename": "essential_commands.md" },
+    { "filename": "merge.md" },
+    { "filename": "syncFork.md" },
+    { "filename": "best_practices.md" },
+    { "filename": "thanks.md" }
+]

2021/2021-03-18_basicGitTraining/slides/merge.md

+# Pull (merge) requests
+
+If you want your changes to be reflected on the `develop` or `master` branches,
+**submit a PR** via the Github interface.
+
+Use the **interface** to make use of your peers to review your code!
+<img src="slides/img/branch-merge.png" class="branch-merge" height="500em"/>
+
+Once merged, you can delete the branch via the interface.
+
+<div class="fragment">
+
+<img src="slides/img/icon-live-demo.png" height="100px" >
\ No newline at end of file

2021/2021-03-18_basicGitTraining/slides/overview.md

+# Overview
+
+1. What is `git`? What is the use of `git`?
+2. GitHub and GitLab
+3. The terminal
+4. Installation of `git`
+5. The editor
+6. How do I configure `git`?
+7. Where and how to start?
+8. What is a fork?
+9. What are branches?
+10. The 5 essential commands (`pull` / `status` / `add` / `commit` / `push`)
+11. What are merge/pull requests?
+12. How do I synchronize my fork?
+13. Best practices
\ No newline at end of file