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Created with Raphaël 2.2.011Feb527Jan2625201611109872131Dec302922211918177652128Nov262524201918171614111097654331Oct292827159818Sep17752116Aug1526Jul2411743218Jun529May232221169876130Apr292524232217161497525Mar2120191864128Feb27231910986532131Jan2723222120131110987543219Dec1817161513121196425Nov181413126229Oct2714119328Sep27262524231913111024Aug231615141328Jun271130May30Apr3226Mar21632112Feb3129Jan2827262524161514927Dec261918161312119825Nov14543231Oct302922111018Sep1731Aug30242214824Jul2321201817326Jun198623May20151426Apr230Mar2013119628Feb24232119Merge pull request #179 from nkindlon/masterformattingdeprecate -abam and update help to show that -a supports BAM[BUG] -s is not required with -nCahnged Closest's RecDistList class to not use mapyet another merge erroranother merge errorforgot context MakefileMerge error correctionssrc/utils/Contexts/ContextBase.cppFixing merge errorsAdded filesAdded closest -fu and -fd, updated helpMerge remote-tracking branch 'upstream/master'Merge branch 'master' of https://github.com/nkindlon/bedtools2addressing merge conflictK closest finally working; chrom name conventions test changeadd missing includesright, the actual spacing code.added note about sorted input.added new "spacing" tool to report distances between intervals in a single file.minor cleanup to splitMerge pull request #172 from lindenb/mastersimple algorithm when n< FOPEN_MAXMerge pull request #170 from lindenb/masterdisplay double/longmoved from long to doubleerror messagebedtools splitbetools poolMerge pull request #168 from nkindlon/masterFixed bug167: stranded chromsweep wasn't workingUpdate conf.pyUpdate README.mdSetting Release-Version v2.22.1v2.22.1v2.22.1fix tutorial makefileupdate help messages.[DOC] update docs for closest and intersect.Merge branch 'master' of https://github.com/arq5x/bedtools2Merge pull request #165 from nkindlon/master