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R3
legacy
bedtools2
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ae48a3ee9f216bd771bf65fc39f7d6d039f91f46
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Branches
8
brentp-fisher-include
jmarshall-warnings3
map-pfm
master
default
merge-assume-stdin
nkindlon-master
nkindlon-master2
pfm_merge
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12
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fixing merge errors, again.
merge conflict corrections
Changes for multi-DB intersection.
Merge pull request #99 from brentp/sloppy
make sure it doesn't accumulate
fix slop with -pct
add @brentp's fisher tool to the help menu.
Merge pull request #94 from brentp/stats
Merge branch 'master' of https://github.com/arq5x/bedtools2
adjust Makefile to accomodate Intel compiler.
Merge pull request #95 from jmarshall/warnings2
Corrected errors caused during merge-conflict resolution
Check stderr is empty, not stdout (fixes test for #46)
Miscellaneous portability / warning fixes
Move "using namespace std" after #includes
Fisher's Exact Test
Corrected merge conflicts
Multiple DB intersect support with unit tests and updated help messages.
First check-in for multi-sweep
Merge pull request #89 from mdshw5/master
Update links in docs to point to the bedtools2 github pages.
Merge pull request #86 from nkindlon/master
Added new -iobuf option and unit tests.
Setting Release-Version v2.20.1
v2.20.1
v2.20.1
update history for 2.20.1
Merge pull request #83 from nkindlon/master
Fixed bug for files with no newlines.
updates for 2.20.1
fix for slop bug in issue \#82
docs formatting
Setting Release-Version v2.20.0
v2.20.0
v2.20.0
tweaks for 2.20.0
correct intersect unit test - was pointing to test binary
Merge pull request #79 from nkindlon/master
More unit tests for column ops on BAM
Resolved merge conflicts with KeyListOps.cpp, test-merge.sh, and test-map.sh
Changes fetch columns by number from BAM files.
Merge pull request #76 from nkindlon/master
Merge pull request #75 from alexpenson/patch-1
Fixed map and merge help messages.
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