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Created with Raphaël 2.2.031Jan2723222120131110987543219Dec1817161513121196425Nov181413126229Oct2714119328Sep27262524231913111024Aug231615141328Jun271130May30Apr3226Mar21632112Feb3129Jan2827262524161514927Dec261918161312119825Nov14543231Oct302922111018Sep1731Aug30242214824Jul2321201817326Jun198623May20151426Apr230Mar2013119628Feb242321191817161513121187530Jan2928272624231816121085231Dec3029211713128729Nov282517161587432126Oct25242111730Sep2827232216151310865131Aug24Jul19131165130Jun29282423221716151414Apr83129Mar22Corrections and unit tests for split bug.Added another file to intersect unit tests for split blocks testing.Update cluster.rstNew unit test for -split -woFixed split bug, added field number accessibility.formatting[ENH] add str() method to QuickString[BUG] change getField() logic in GffRecord[ENH] add absmin and absmax to VectorOps and map tool.[TST] add new tests for mapMerge remote-tracking branch 'upstream/master'first pass at using Context and PFM for the map tool.tweak[TST] new unit tests for proper field reporting for BED* intersectionsMerge pull request #20 from nkindlon/masterMerge remote-tracking branch 'upstream/master'Changed handling of strand in records to allow non-strand strings in sixth field of records.Merge branch 'master' of https://github.com/arq5x/bedtools2[BUG] fix extra TAB at EOL in the annotate tool.Update README.rstMerge pull request #15 from nkindlon/masterSetting Release-Version v2.18.2v2.18.2v2.18.2Refactored Context class into Base and Derived classes for cleaner future development.ask travis to auto-run unit tests.tweak travis configadd travis configUpdate README.rstMerge pull request #14 from nkindlon/masterAdded fix for Bam files with empty headers. Added test for this to unit test.[DOC] cleanup docs to facilitate man page creation.[DOC] fix docs typosMerge pull request #7 from nkindlon/masterAdded -nobuf option and definition to intersect help menu.Merge pull request #6 from nkindlon/masterAdded -nobuf option, and changed flush to occur after every record if -nobuf is set.Changed outbuf size constant to 16384 from 16386, which was a mistake.Corrected comment and constant for MAIN_BUF_READ_SIZE.Changed input stream buffer to only 1Kb to improve performance for small files.Setting Release-Version v2.18.1v2.18.1 pfm_mergev2.18.1 pfm_merge[BUG] fix compilation errors on CLANG and with pre-installed bamtools libs.