src/intersectBed/Makefile

src/intersectBed/intersectBed.cpp

src/intersectBed/intersectBed.h

src/utils/BamTools-Ancillary/BamAncillary.cpp

src/utils/BamTools-Ancillary/BamAncillary.h

src/utils/BlockedIntervals/BlockedIntervals.cpp

src/utils/BlockedIntervals/BlockedIntervals.h

src/utils/bedFile/bedFile.h