Makefile

src/intersectFile/Makefile

src/intersectFile/intersectFile.cpp

src/mapFile/Makefile

src/mapFile/mapFile.cpp

src/nekSandbox1/nekSandboxMain.cpp

src/sampleFile/Makefile

src/utils/BinTree/BinTree.cpp

src/utils/BinTree/BinTree.h

src/utils/Contexts/Context.cpp

src/utils/Contexts/Context.h

src/utils/Contexts/ContextBase.cpp

src/utils/Contexts/ContextBase.h

src/utils/Contexts/ContextIntersect.cpp

src/utils/Contexts/ContextIntersect.h

src/utils/Contexts/ContextMap.cpp

src/utils/Contexts/ContextSample.cpp

src/utils/Contexts/Makefile

src/utils/FileRecordTools/FileReaders/BamFileReader.h

src/utils/FileRecordTools/FileReaders/FileReader.h