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Commit a1af7c6a authored by Aaron Quinlan's avatar Aaron Quinlan
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Version 1.2. Added closestBed, linksBed and subtractBed 

	1.  Added subtractBed.
		A. Fixed bug that prevented "split" overlaps from being reported.
		B. Prevented A from being reported if >=1 feature in B completely spans it.
	2.  Added linksBed.
	3.  Added the ability to define separate windows for upstream and downstream to windowBed.
parent 1eb06115
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